NONHSAT139259
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139259 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1306 nt |
Genomic location |
chrX-:155255329..155257542 |
Exon number |
5 |
Exons |
155255329..155256270,155256349..155256502,155256671..155256747,155257025..155257109,155257495..155257542 |
Genome context |
|
Sequence |
000001 TGGAGGAAAG ATGAGTGAGA GCATCAACTT CTCTGACAAC CTAGGCCAGT GTGTGGTGAT GCCAGGCATG CCCTTCCCCA 000080
000081 GCATCAGGTC TCCAGAGCTG CAGAAGACGA CGGCCGACTT GGATCACAAT CTTCTCAGAG CCCAGCCAGG GGCCCCCAAG 000160 000161 AAAGGCTCTG GTGGAGAACC TGTGCATGAA GGCTGTCAAC CAGTCCATAG GCAGGGCCAT CAGGCACCAA AGGGATTCTG 000240 000241 CCAGCATAGT GCTCCTGGAT TAGTGATACA CCCGGCACCC TGTCCTGGAC AAGCTGTTGG CCTGGATCTG AGCCCTCGTG 000320 000321 GAGGTCAAAG CCACCTTTGG TTCTGCCATT GCTGCTGTGT GGAATTTCAC CAGAAGTAGG CCTCTTCCTG ACAGGCAGCT 000400 000401 GCACCACTGC CTGGCGCTGC GCCCTTCCTT TGCTCTGCCC GCTGGAGACG GTGTTTGTCA TGGGCCTGAT CTGCAGGGAT 000480 000481 CCTGCTACAA AGGTGAAACC CAGAAGAGTG TGGAGTCCAG AGTGTTGCCA GGACCCAGGC ACAGGCATTA GTGCCCGTTG 000560 000561 GAGAAAACAG GGGAACCCCG AAGAAATGGT GGGTCCTGGC CATCCGTGAG ATCTTCCCAG GGCAGCTCCC CTCTGTGGAA 000640 000641 TCCAATCTGT CTTCCATCCT GTGTGGCCGA GGGCCAGGCT TCTCACTGGG CCTCTGCAGG AGGCTGCCAT TTGTCCTGCC 000720 000721 CACCTTCTTA GAAGCGAGAC GGAGCAGACC CATCTGCTAC TGCCCTTTCT ATAATAACTA AAGTTAGCTG CCCTGGACTA 000800 000801 TTCACCCCCT AGTCTCAATT TAAAAAGATC CCCATGGCCA CAGGGCCCCT GCCTGGGGGC TTGTCACCTC CCCCACCTTC 000880 000881 TTCCTGAGTC ACCCCTGCAG CCTTGCTCCC TAACCTGCCC CACAGCCTTG CCTGGATTTC TATCTCCCTG GCTTGGTGCC 000960 000961 AGTTCCTCCA AGTTGATGGC ACCTCCCTCC CTCTCAACCA CTTGAGCAAA CTCCAAGACA TCTTCTACCC CAACACCAGC 001040 001041 AATTGTGCCA AGGGCCATTG GGCTCTCAGC ATGACTATTT TTAGAGACCC CGTGTCTGTC ACTGAAACCT TTTTTGTGGG 001120 001121 AGACTATTCC TCCCATCTGC AACAGCTGCC CCTGCTGACT GCCCTTCTCT CCCAGAGAAA CAGGTCAGCT GGGAGCTTCT 001200 001201 GCCCCCACTG CCTAGGGACC AACAGGGGCA GGAGGCAGTC ACTGACCCCG AGACGTTTGC ATCCTGCACA GCTAGAGGTC 001280 001281 CTTTATTAAA AGCACACTGT TGGTTT |
Predicted Small Protein
Name | NONHSAT139259_smProtein_1070:1288 |
Length | 73 |
Molecular weight | 8186.2908 |
Aromaticity | 0.0833333333333 |
Instability index | 64.0319444444 |
Isoelectric point | 10.0609741211 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0372921941549 |
Amino acid sequence | MTIFRDPVSVTETFFVGDYSSHLQQLPLLTALLSQRNRSAGSFCPHCLGTNRGRRQSLTP RRLHPAQLEVLY |
Secondary structure | LEEEELLLEEEEEEEEELLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLEEEEEL |
PRMN | - |
PiMo | - |