NONHSAT139351

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT139351

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2110 nt

Genomic location

chrY+:6786723..6788832

Exon number

1

Exons

6786723..6788832

Genome context

Sequence
000001 GTGCTAAGAT TACAGTTGTG AGCAACTATA CTCCACTAAA GCAGATAGAA TTATAATGCT TGGAGCCCAA TATGCTTATA 000080
000081 TTTTCCTATT TTCTGAGTTT GGATTTGGGT CTGGAAAGGT ATCTTTATCA GTTAGGATGT CTAGTAACTT GCTTGCTTTT 000160
000161 TTTTCCTGTT ACCTTTTCTC CCTTAAATAT TTTTTTTTTT TTTTTGAGAC AGAGTCTCGC TCTGTCTCTT GTGGGTCTCA 000240
000241 GGCTGGATTG CAGTTGCGCA ATCATGATCT CGGCTGACTG CAACCTTTAC CTTCTGGATT CAATCAATTC TCCTGCCTCA 000320
000321 GCTTCCTGAG TAGATGGGAC TACAGGCGGG CACCACCATG CCCGGCTAAT TTTTGTATTT TTAGAAGAGA CGGGGTTTCA 000400
000401 CCGTGTTGGT CAGGCTGGTC TCAAACTGCT GATCTCATGA TCCACTTGCC TCGGCTTCCC AAAGTGCTGG GATCACAGGC 000480
000481 ATGAGCCACC ACGCCCGGCT TTCCCTCTTA AATTTTAGGA CTATAACTGT ATACTTTTAT TTTTTAAATT ACCATATAGT 000560
000561 AAAATTGGCT CTTTGGTTGT GTAGCTTTAT GTGTTTTGAT GTGTGTATAG ATGGATGTCA TAATCAGGAG AGAGAACATT 000640
000641 CCCCTAAGCC CAGAGATGTC CATGGTGCTA TCCTCCACAG CATGTTTCTC GGCAGTCACT CTGCCCCCAG CCCCAAACAT 000720
000721 GGGGCACCTG CCTGTAGGTG CCACAGAAGG CAACATCATG GCCTGTTAAA TACAGTAAGA CATTCTTCTT CAAAGGGTTA 000800
000801 ACTTGTTGAA CTCTCCTTGT CCTTTGTTCC CTGCTTTCAA GGCCAGACTC CCTTACTCTC TGTGTTCCTT TGCCCTGGGA 000880
000881 AACAACCTTC CTCTTGGTCT TTATCTATAG AGTCCACATT CCACATCTGC TCCTCACTCT GTAAATCATC CCTCCGGTCG 000960
000961 AAACACTCTC TGTCTCCACT AAAACTGTTT TCTCACTATT GTAACCACAT CCCTGCACTT CTCAAATTAG CCAATTGGGT 001040
001041 TCAGCTTAGA TTGTGCAGTC CAACTCTAGC CAACAGATAC TGGACATGGC AGTAGGAGCC CAATGAATTA AAGATAAAGT 001120
001121 GACTGCTTTC CTTTGTTCAG AGTGCTTTCA TGGTGACCAA ACTAATGAGC AGCACCCTTC TGCAGAGGTA AACTTTGCCT 001200
001201 TGCTGAGAAA CCAATTGTTG GCGTGTTTAT TTCATTTATG ACTTTGAGCT TTATTTCTAA CATGGCCCAA AGTAATCCTC 001280
001281 TTTTCTTGAA CACATGGTAG AATGCCCTAG GTGAATCCCT CCAGTCTTCC AGTACCATCC TTGACTCCTC TCTCTGATGA 001360
001361 CACATGAACT TTATGCTTTT GCACACTTCA GGCAACACCA AAAGAAAGGA AAAGAACAGC TTAGCTTCTT AATGTGTGTA 001440
001441 AGAAACCACA GTGAAAAAAA AATCAGGTGT GTTGTTGAGG CTGCTAAAAG CTTTCCTTTT TTTTCTGTGC CAGTTCTCGC 001520
001521 TGCCTCATTG GTTGAGATGG GATGTCCTTT TTGATGTCCT CTTTAGAGAG TGTTATCCTC ACCTTTTTGC ATAGTCCTAC 001600
001601 CAAAAGACAC CTCACATGCA AAGTGTAACA GAAAATTACA GTCATGACTT TAGTTTTAAA AACAGGACGT ATATTCATGA 001680
001681 AGAATGTTTG CTGTTTTCCC AGTGGGTTAA TCATATGAAT ATAAAACAGA CTAAAAGTAT CAAGTTGTTT TTGCATTTAT 001760
001761 TTATTGTAGA AATAAAATGG ATTGCTACCT CTGAGCTTCT GAGAAGCTGT TAACCTGTGT TTTACTTTGG GTCATAATGT 001840
001841 CGCTTTCTGT GATCTCATAT GAAGTGACGT TTTCTAGAAT AATCCTTATT CTGGTATTTC GGGGTCTTTT ATTCTGCCTG 001920
001921 AAGTGGTTGT GTGAAGTCAC AGAATATGTG CATGTCCTCC TATGTAGAGT TAAAGGGCTG AAAGAGTGGC CTCAAGCCTT 002000
002001 CCCCTCCCTC CCAGGTGTGA AAATTTGGAT TTCAAGGTCT GGGAGGCCAT GTTTTTTTCA GACCGGTTAA GGATGATCAT 002080
002081 TTTATGTTAA ATAAACATTG GGATAAACTT
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Predicted Small Protein

Name NONHSAT139351_smProtein_71:328
Length 86
Molecular weight 9534.2458
Aromaticity 0.152941176471
Instability index 51.3576470588
Isoelectric point 4.35943603516
Runs 14
Runs residual 0.0281639928699
Runs probability 0.0739584121937
Amino acid sequence MLIFSYFLSLDLGLERYLYQLGCLVTCLLFFPVTFSPLNIFFFFLRQSLALSLVGLRLDC
SCAIMISADCNLYLLDSINSPASAS
Secondary structure LEEHHHHHHLLLLHHHHHHHHLHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL
LLEEEEELLLLHHHHHHHLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHH
HHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooTTTTTT
TTTTTTTTTTTTiiiiiiiiiiiii