NONHSAT139377
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139377 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1345 nt |
Genomic location |
chrY-:7936937..7938764 |
Exon number |
2 |
Exons |
7936937..7938159,7938643..7938764 |
Genome context |
|
Sequence |
000001 tttcaccatg ttgacctggc tgattttgaa tttctgacct catgtgattc tctcacctca gtctcccaaa gtgctgggat 000080
000081 tacaggcatg aaccactgct cctggccATT CTTCATATTT CTGCTGACTC TTTTCGTTTT CCTGCAGAGA TATTGCTGGA 000160 000161 GCATGACATA TAAGATTCAT TTCAAAAAGT GAATCTGAGA AAATATAGAA GCTGTGACCT TAATAGTTTA CATTAAAAAA 000240 000241 AAAAAGACTA CCAAAGTGTG GATAATTGCA AGGGGCAGAA GAGCAGTTAT AATGGCCTTC ATCAATGTTT GTCAACTACC 000320 000321 CATAGCAAAA CCTGTCAATG AAATAAATGT GGCAAAGCTT TTGAGTTGTG CTCAGTCTTT ACTGAACATA AGAAAATTTT 000400 000401 CAGCATAGAG AAATGCTACA AATGTGAAGA ATGTGGCAAA GACTGTAGGT TGTTCTCAGA TATTACTATA CAGAAGTGAA 000480 000481 TTCATACTGC AGAGAGATGC TACAGACATC AACAATGTGG CAAAGCCTGA AAATATCTCA AATGTTACTG AATATAAGAG 000560 000561 AGCTCATGCT GGGATATCTA ACAAATGCAA TGAATGTGGC AAAACATTTA CCTGCTCCTC AACCTTTATT AAACAAAGAG 000640 000641 AAATCATACT GGAGACAAAC CCTACATATG CGAAGAATGT GGCAAAGCCT TTAAGTGCTT CTCTGACCTT ACTAATCAAA 000720 000721 AGAGAAATTA TACTGGAGGG AAATCTTGCA AATGTGAGGA ATGTAGCCTA TAGGTTGTTC TCAGAACTTG CTAAATATAA 000800 000801 GATAATTCAC ACCGGGGAGA AACTCTACAA ACGTGAAGAA TGTGATGAAG ACTATAGTTG CTTCTCAGAC CTTACTAAAC 000880 000881 ATGATAATTC ATAGTGGAGA GAAACCTTAC AAATGTATTG AATATAATAA AAGCTTTTAT GTGGTTCTCA GCCCTTAGTA 000960 000961 AACACAAGTG TACATCTGTG AAGAACATAA CCATACATCT GTGAAGAATG TGGAACTGCC TTTACCTGCT TCTTCACCCT 001040 001041 TATTAACCAC AAGAGAATTA ATATGGAAAA GAGACCTTCT GAATGTGGAG AATGTGGCAA AACCTTTAAG TGCTTCTCAG 001120 001121 ACATTACTAA TCATTAGATA ATTCACACTG GAGAAAAACC CTACAAATGT GAAAAATGTG GCACAGCATT GAGTTTTTCT 001200 001201 CACACCTCAT TAGAGAAAAG AGAATTCATA CTAGAGAGTA GATTTACAAT TGTTAAAAAT GTGGAAAGTC TTTAACAAGT 001280 001281 TCTCATACTG TGTTCAACAT CAGAGTCTTC ATACCGAACA AATGCAGTAT AAAGGTAATG ACTGT |
Predicted Small Protein
Name | NONHSAT139377_smProtein_938:1003 |
Length | 22 |
Molecular weight | 2444.915 |
Aromaticity | 0.0952380952381 |
Instability index | 61.7523809524 |
Isoelectric point | 9.78851318359 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0189895778131 |
Amino acid sequence | MWFSALSKHKCTSVKNITIHL |
Secondary structure | LLHHHHLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |