NONHSAT139379
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139379 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
992 nt |
Genomic location |
chrY-:8132490..8145229 |
Exon number |
7 |
Exons |
8132490..8132806,8133216..8133303,8133375..8133485,8134356..8134470,8139321..8139470,8144595..8144697,8145122..8145229 |
Genome context |
|
Sequence |
000001 ATGGTAGAAG CAGATCATCC AACAAGCTTT TCATTGGTGG CCTCAATAGA GAAACCAATG AAAAGATGCT TAAAGCAGTA 000080
000081 TTTGGGAAAC ATGGTACCAT ATTGGAAATT ATTTTGATAA AGGATCAAAG AGCAAGTCCA GAGACTTTGC ATTTATTATT 000160 000161 TCTGAGAACC CTGCAGATGC TAAGAATGCT GCCAAAGATA TGAATGGAAA GATGAGATCA AATTACATGC TTGATCTCAA 000240 000241 TATGAATTCT TATAGGGAAA CCTTTCCAGT TAAAAGAGGT CCATCTTTAG GAAGTGGAGG TCCTCCTCCT AGAAAATCTC 000320 000321 TTCTGCTGTC GTAAGAAGCA ATAGTTGTAT GGGAGGCCAA GGGCCCATAT CATGTGGAAG AGAGAATTAT ACAGGTCCTC 000400 000401 CACTCAGAGA GCCCATCTCT TCTTGGAGAA ATGACCATAG GTCACCAAGA AATGATAGTT ATGCTAGTAA GGATAGAAAT 000480 000481 CAGTGAATTT CCCCAGAAAC CAGGGATTAT GCTCCACCAC CTAGAGGCTA TACATACTGT GATTATGGTC ATTCTAGTTG 000560 000561 GGATGAACAT TACTCTAGAG GATATAGTTT TTATGATGGC TATGGTGAGG CTTGTGGTAG AGATCATTCT GAACACCAAG 000640 000641 GTGGAAGTTC TTACAGGATG CATTTCAGAG ATATGGGACC TCTCATGGTG CACCACCTGC ACAAAGGCCT CAGATGTCTT 000720 000721 ATGGTGGAAG CAGCTACCAT GATTTTGATT TTAACATGTC TAACAATACA TGAGATAGAT ATGGCAGAAG TCGTGAGAGT 000800 000801 TACTCAAGGA GCTGTGGTGA TTTTTATTCC TGTGGTCGTG AGCACATTGG CAGAAAAGAC CAAAGGAATC CACCTTCTCT 000880 000881 GGATAGGGTG CACCCTGCTC CTCGTGAAGC ATATGGTAGC TCAAGATATG TGGCATCTAC AGGAGATGAT GGGGAAAGTC 000960 000961 GATCTGAAAA AGGAGACCGA AGCAGGTATT AA |
Predicted Small Protein
Name | NONHSAT139379_smProtein_65:202 |
Length | 46 |
Molecular weight | 5228.4224 |
Aromaticity | 0.0444444444444 |
Instability index | 44.5911111111 |
Isoelectric point | 10.4326782227 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.0416666666668 |
Amino acid sequence | MLKAVFGKHGTILEIILIKDQRASPETLHLLFLRTLQMLRMLPKI |
Secondary structure | LHHHHHLLLLHHHHHEEELLLLLLHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |