NONHSAT139469
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139469 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1476 nt |
Genomic location |
chrY-:13901758..13903233 |
Exon number |
1 |
Exons |
13901758..13903233 |
Genome context |
|
Sequence |
000001 AGGACCAAGT ACTGCAGCAG CAGCAGCAGC ATCAAACAGT TGCATGAGAA GGAAAGCTTG GAACTTGAGG TGCTCCCTGC 000080
000081 AGAGGCAAGC ACCCAGCATG GCAGACCAGG TGGCCAACAA GGTGGGAGGT GTGGCTGTCG TCATCACGGA GCCAAACACA 000160 000161 CCAAGGAGTG CAGCAAAGAT GAAGGTTCTA AGTGCAAATG GCAGCCTTGA TTTTTAGAGC AACTGGCTGG GGCTTGATTG 000240 000241 GTTAAATAAG TACTTACATA ACAGGATGCT TACCATGATC CCCAGTCAGA ATTTGTAGGT GCCCCATAGA AGTGGATGCC 000320 000321 TGCTGGGAGT CCAGGTGCAG GCAGTGGTTT TGGGTACATA TGCTTCCTAC AGTCCACTTA TCACCACAGA AGGGAATCTG 000400 000401 TGGAGTTGGA GTTGAAATGA AAAGGGGCAG CTGAAACATG GTGACACCAA GAAAGCTGAA GCACCCAAAC TGATAAAGGG 000480 000481 TCCCAGTCCT GGGGTTACTG TGTCAGCAGC CTATGGGTGG AGCCACAACC CAGTGTTGCT GGAAGTGGGC ACTGCATTTG 000560 000561 CCTTTGGAAA GAACAAGATG CAGAAGGTGG GGCTTGGTCG TCAGACAGAT GCAGTTCCTA GCCCTGCGCA GAAGGTATAC 000640 000641 AAGGCCAGCC ATTCACCAAA ATGGTCCATG GGACTGAATT CAGTGGGATG ATGGACTGca aaaaccaaaa ctaaaaccaa 000720 000721 aacaaaaaac aaaaaacaaa aacccaaacT TTATTCCTTT GGGAGCCCTG AATATGGTCA CCTGGTATAC AACTCATGAT 000800 000801 GAGAAGTTCA TGTCCCCACT GCTGTGGATA GAGTCCAGCT GGGAGCTGAT GCCCAGGCAA GTGGCTGTCT TCATGGAGAA 000880 000881 GGAAGAAAGA TTAGCAGATT TTGCCAGTAC CACACGTGGT TGTGCAGATG TGGCCTGTAG AGCTAACCAC ATGCTGGTCC 000960 000961 TGGACTCCCA GAAGCACATC TTCTTCTGAC ACGGGGTGGC TATTGCTGGC TGGACCATGT GGAGCAGAAA AACGAGATGG 001040 001041 TCCACCTCCC ACAAGCGGTT TGGCTTTCCT GGAATGGGGT CCCCAGATCT ATGCTGGTTA TGCCTGGTCC TTTGCTGTCA 001120 001121 GTGAAGAGGG TGACGTGTTT TTCTGGGAGG CCACCAACAC TTCCCATGAG TCTATCATGT ACCTGAAAGC AGTGCTGAAC 001200 001201 ATCCGTGGCT GGAGAATGTG GAGCCTGGCT CATGGGAAGA GCATCATGGT GGCTGCAGAT CATCTGGGGC CAGTCCCTGA 001280 001281 TCTTTGGTGA ACTGGGCAGA GGGGACTCAC AAGCCCACAT CTCCCACTGC GGTCCAAGAC ATGAAGACGC TGCATGGTGT 001360 001361 CTTCTCAGAG CAGGCTGCCA TGGGTTACTC CCGCTCCTTG GTGATGGTGA GAGATGAAAG TGATACCCAG AAACTGCCAG 001440 001441 AGTACAAACC CCTACCCTCT AATTCTCCCA GAAACT |
Predicted Small Protein
Name | NONHSAT139469_smProtein_773:988 |
Length | 72 |
Molecular weight | 8383.5961 |
Aromaticity | 0.12676056338 |
Instability index | 57.2 |
Isoelectric point | 5.44976806641 |
Runs | 11 |
Runs residual | 0.00637509266123 |
Runs probability | 0.0439450145333 |
Amino acid sequence | MVTWYTTHDEKFMSPLLWIESSWELMPRQVAVFMEKEERLADFASTTRGCADVACRANHM LVLDSQKHIFF |
Secondary structure | LEEEEELLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHLLLE EEELLLLLEEL |
PRMN | - |
PiMo | - |