NONHSAT139514
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139514 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
680 nt |
Genomic location |
chrY+:15864978..15983586 |
Exon number |
7 |
Exons |
15864978..15865039,15866520..15866669,15902799..15902846,15970397..15970526,15971548..15971701,15980947..15981008,15983513..15983586 |
Genome context |
|
Sequence |
000001 CCACCTGTTC CAAGTTTCCA CCGTCTCGCC TCAGGGAAAT TCTGGGGGGA CCAAAAGGAG AGGGTCACCC CACACCTCCA 000080
000081 ACTCCTGCAA ATGAGCCCAT CCAGAAAGCT GTCTCTGGAG CACATGCCTG TTTCCATCTT CTCTTGCACA GTTTCAGGCC 000160 000161 ATGTTTAAGG ATGGGAGAAG ATTGCCTGGC CTCCAGCCTG GATGCCAGCC AGAACAGTGG TTCCCTGCTT TGGTGCCAGA 000240 000241 ATCACAAGTG ATGTTCTAAG GAGAACTATG AATGCTTTAC CAGTTGTGAG TTCCTCAAAT ACACCCTGTT GGTGAAGCAG 000320 000321 GGGGACTGTC CAGCTCCTGA GAAAGCCAGT GGATTTGCGG CCGCCTGCGT TGAAAGCTGC GAAGTTGACA ttgagatggt 000400 000401 gtcttgctgt gtctctcagg ctagagtgca gtgtgcagtg gcacagcctc agcccactgc agcctcccca tcccaggttc 000480 000481 cagagattct cctgcctcag cctgccaagt agctgggact acaggcatgc cccaccatac ccggGTGTCC CCCTGAAGCC 000560 000561 CAGAGAAGGG TTACAATTTA CAGAATTGCC GTCTGGACAG CTGGAGATCC AACCAACATG TGAGAATAAA AGGTGACATG 000640 000641 TTCCCTGTGC TCTGTGAGTT CAACTGACTG ACATAAGACC |
Predicted Small Protein
Name | NONHSAT139514_smProtein_395:511 |
Length | 39 |
Molecular weight | 3934.5867 |
Aromaticity | 0.0 |
Instability index | 94.3894736842 |
Isoelectric point | 7.72894287109 |
Runs | 6 |
Runs residual | 0.014716066482 |
Runs probability | 0.0222133898605 |
Amino acid sequence | MVSCCVSQARVQCAVAQPQPTAASPSQVPEILLPQPAK |
Secondary structure | LEEEEELHHHHEELLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |