NONHSAT139595
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139595 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1000 nt |
Genomic location |
chrY-:20938165..20941313 |
Exon number |
3 |
Exons |
20938165..20938289,20938702..20939447,20941185..20941313 |
Genome context |
|
Sequence |
000001 ATACAAACGT GAGAAATCTT TTACAACTTT AAATGGGGAC ATTAACAGTC ATCAAAATGT TCTTGATTCT TGGGAATAGG 000080
000081 ATATCAAATG GAAGGTGCAA ATGCACATCA TTGTAAAATG TGATAAAAAG TTAACACAGT TAAGCACTTG CTATTTAAAT 000160 000161 AATTTTCTTT TGTTTCTGTG GCCAACACAA ATGATTTGAG TACGACTAAA ATAATGTGCA ATTACATTCG GTGATTATTT 000240 000241 TGAATTTCCT TGGGAGCTGG ATATGGGACC TTACACAGCA GCATGCATTG CAAAGCTGGA ACAGAATAAT TTCAAGTCAG 000320 000321 AAAATCAGTT GATTCAACAG AAAGAGTAAC CTGAAAATAA AACTACAAAG ATCACAAAAT ACAGACTTGC AGATGTGCCT 000400 000401 GTACACAGTG GTCTAGCAAG CAGTGGGTAT TATTATTCTT ATATTATTCA AACAATGGTA GGATGATGAC TGCGATTCCT 000480 000481 GGTATAAATT TGATGATGAA GATTTAGCAG AATTTAAAAT GGATGATGAT CAAGAAATTT TAAAAATCAG TGTTTGGATG 000560 000561 GAGAGTACAT AAATATATTT GATCATACGC TGAAGTGCAT GTCACATAGA CGGTAAAAGA GCTGGTAAAT TGCTTATATA 000640 000641 ATTTTCAAAC AATAAACAAA TGGACATGAT AGATGAAGAT GATGAGATGA TAAGATATAT ATTATGGCTA ACTCTTGTGA 000720 000721 GACCTCATCA CATTATTATG TCACCAGCCT TTGAGAAAAG TGTATACTAA CAAAATGTGA CACTTACGCA AAAGTGAAAG 000800 000801 CAATAAAGTT GAGAGCATTT GCAGTTTGTG AAAGAACTGC TTATATATAT TGGTGTTTAT TGAAGTCCTG TTCATAGCAG 000880 000881 AATTATTTTT CTGCCTGCAT CAAATTAAAT GACTATCATT AGCATACAGT TTGCACCTAT ATTCCTCATT ACCACTGGAT 000960 000961 TTTACATTAA AAAAATAGCT TGTGGTCCTG CCAGTGACTG |
Predicted Small Protein
Name | NONHSAT139595_smProtein_659:769 |
Length | 37 |
Molecular weight | 4409.1329 |
Aromaticity | 0.111111111111 |
Instability index | 73.5555555556 |
Isoelectric point | 4.63385009766 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0374870668989 |
Amino acid sequence | MDMIDEDDEMIRYILWLTLVRPHHIIMSPAFEKSVY |
Secondary structure | LLLLLLHHHHHHHHHHHHHLLLLLEEELLHHHLLLL |
PRMN | - |
PiMo | - |