NONHSAT139654
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139654 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
947 nt |
Genomic location |
chrY-:23592583..23599131 |
Exon number |
6 |
Exons |
23592583..23592883,23593292..23593380,23593473..23593583,23594470..23594584,23596577..23596729,23598954..23599131 |
Genome context |
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Sequence |
000001 TCTTTGCATG GAAAAGCAAT AAAACTAGAA CAAGCCAGGA AACCATCTTT TCAAAGTTGT GGTAGGCGGA GACCACCACC 000080
000081 TTCTTCAAAA AACAGGACAC CTGCAGGAAG TCTGAGATCT GGAAGACGAA GTAGTGGAGG AACAAGAGGG TGGCTTCTCT 000160 000161 CATATGAAGG ACACTTCGAT GATGGTGGAT ACACTCCTGA TCTCAACATG AGTTCTTCTA GGGGACCCAT TCCAGTTAAA 000240 000241 AGAGGTCCCT CTTCAAGAAG TCGAGTCCCT CCTCTGAAAA AATCTGCTCT TTCTGCTATG GTAAGAAGCA ATAGTTGGAT 000320 000321 GGGAGGCCAA GATCCCATAT CATGTGGAAG AGAGAATTAT GGAGGTCCTC CATGCAGAGT GACAATCTCT TCCTGGATAA 000400 000401 ATGACCATAT GTCACCAAGA GATGATGGTT ATGCAATTAA GGAGAGACAT CATCCAAGTT CCCGAGAAAC TAGGGATTAT 000480 000481 GCTCCACCAC CTAGAGGCTA TGCATACTGT GATTATGGTC ATTCTAGTCA GGATGAACAT TCCTCTAGAG GATATAATGA 000560 000561 TCATGGTGGC TACTCTGAGG CCTGTGGTAG AGATCTTTCT CAATGTGCAA GTGGAAGTTC TTACAGAGAT GCATTTCAGA 000640 000641 GATATGGACC TCTCATGGTG CAGCACCTGC ACAAGGACCT GGGATGTCTT ATGGTGGAAG CAGCCATCAT GATTATAACA 000720 000721 ATACTCGAGA TAGATATGGC AGAAGTCGGG AGAGTTACTC AAGGAGTTGC AGTGATTTTT ATTCCTGTGG TCATGAGCAC 000800 000801 TTTGGCAGAA AAGACTGAAG GAATACACCT TCTCTGGATA GGGTGCACCC TGCTCCTCAT GTAGCATATG GTAGGTCAAG 000880 000881 TTAAGTGGCA TCTATAGGAG ATAGTGGGGA AAGTCGACCT GAAAAAGGAG ACTGAAGCAG ATACTAA |
Predicted Small Protein
Name | NONHSAT139654_smProtein_602:817 |
Length | 72 |
Molecular weight | 8181.86 |
Aromaticity | 0.140845070423 |
Instability index | 56.1621126761 |
Isoelectric point | 8.79901123047 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.0202639614404 |
Amino acid sequence | MCKWKFLQRCISEIWTSHGAAPAQGPGMSYGGSSHHDYNNTRDRYGRSRESYSRSCSDFY SCGHEHFGRKD |
Secondary structure | LLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLEE ELLLLLLLLLL |
PRMN | - |
PiMo | - |