NONHSAT139676
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139676 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
739 nt |
Genomic location |
chrY+:24329997..24332168 |
Exon number |
5 |
Exons |
24329997..24330390,24331382..24331463,24331702..24331772,24331860..24332003,24332121..24332168 |
Genome context |
|
Sequence |
000001 AGGCCCGCAG GCCTCTCCTG GAGTTGCCCC CAGAGTTGAC GGGTGCCGGG GGGGTGGGGT GGGAGGCACA GGCTTTGCTC 000080
000081 TGTTGGAGCC TCAAGGAGGG CACCATGTTA AGGCTGGAGG CTGTGCAGGA GAGGATGGTC TGTGCACAGA GCAGGAAGAC 000160 000161 AACCCTGCGG GGAGAGGCAT GCTAGTGGGG GATGACATCA TTGCAGAGAT GGAGGTGGTG GCCAAGGAGG AAGGCCAATG 000240 000241 TGGAGCCACA GCAGGAGGAC CTGCAGGCAC AGCCTGGCCC TGGCCCCAGT ACGCCCCGGC CAGCAACAGA CTCGCTGGAC 000320 000321 GTCCTTCACT TGGAGCTCGG CTACGTGAAT GTCCCAGGCC ACAGGGCATC CCCGGCTTCT GGGCCAGAGC CATAGTGCGG 000400 000401 CACACCGAGA TGTTGGCCGG GATCACAAAT GATGATGAAG TCCTGCTAAG CTACGTACGT GATGGATTTG CAGGTCTTTT 000480 000481 CCTTTTATCA CAGTCTCTAC TTCCACAATG AAGTGATCAT TCAGGAGTAC TGCCTTGGCA TCCTCGGTAC GGGATGTCTC 000560 000561 ATTCCACTGC AGTCTAGTGG TTGTGGGATC ATGAAGGTCA AGCCTCCAGC TGCAGGCCGT ACAGCTCCTA CCTGACCTTC 000640 000641 TTCAGCTGGT TGGCTGACCA TGACTGCCCA GGTTCTGGCA GGATTGCTGA GATCATCAGC CAGAACCTGT AGCTCAATCC 000720 000721 CCTGCAGTAC TTCTCCAGG |
Predicted Small Protein
Name | NONHSAT139676_smProtein_191:394 |
Length | 68 |
Molecular weight | 7464.2297 |
Aromaticity | 0.0597014925373 |
Instability index | 87.8044776119 |
Isoelectric point | 6.71246337891 |
Runs | 7 |
Runs residual | 0.0388372274752 |
Runs probability | 0.0208191384662 |
Amino acid sequence | MTSLQRWRWWPRRKANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLELGYVNVPGHRAS PASGPEP |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLEEEEEELEEELLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |