NONHSAT140376
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140376 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1062 nt |
Genomic location |
chr16+:7872865..7875609 |
Exon number |
2 |
Exons |
7872865..7873879,7875563..7875609 |
Genome context |
|
Sequence |
000001 catcaagaaa taaccataaa aatgggcaac cagcagctct cagggctgct ctgtctatgg agttgccatt ctcttattcc 000080
000081 tttactttcc taataagctt gctttcgctt tatggacaca ccctgagttc tttcttgtgc aatatccaag aatcctcact 000160 000161 tggcatctgg attgggaccc ctttcctgta gcaAATTCCC TCTTCTGTCT GGGTTGAGGC ACaggtggtt gggtcacagc 000240 000241 ttggatttat acattttagg gagacatgag acatcaatca ttatgtgatg tccataagtt gggtccagaa aggcgggaca 000320 000321 acttgaggca gggaaggggt ttccaggtca taggtaaata agttgcattc ctttgagtct ctgatgaacc ttttactgaa 000400 000401 tacacaattt acctgtgaga ggagggtaga ggaatagtca cttatgcctt agtctgggtt agtgaaaaaa tagggcagag 000480 000481 gaagcaatca gatgtgcatt tgtctcaggt gagcagaggg atgagtttga gttctgtctg tcttttgtcc aaacgcaatt 000560 000561 tccttgtgag caaattgtag cttttttatc gttgtagcta tcttatttag caataaaatg gaggcaggta tgcttgactc 000640 000641 agttcactgt ttgacttcct tttgccttag tgattttggg ggcccaagat ttcttttcct tttgcaAAGT GTAGAATGAA 000720 000721 ATCCCGAAAT ATTTTTTTCT TGGTGACCTT TCTCTCCTCA GGAGTGGAGA TCTGGTCTAC TGTAAACAAA GGGTATCGAA 000800 000801 ACAATGGAAC AAACGTTAAT TTCAGGAAAC AAAAGACCAG AAGTTCAAAC GTTGAAGAAT GATTTCACTA CGTGACCACT 000880 000881 GAACAATCAC AGATATACAT TAATTCCAGA ATTTTCTAGG TTTTTTCATA CCAGAGCATC AATACCCCTA AAAACCTTTT 000960 000961 CTTGCTGGCC TTGACCACCC TTCGTACTAG GATGTAGTGT TGATGTTTTA CTCTGcctcc caagtagctg ggattacagg 001040 001041 catgcaacat cacacttggc ta |
Predicted Small Protein
Name | NONHSAT140376_smProtein_56:190 |
Length | 45 |
Molecular weight | 4974.7418 |
Aromaticity | 0.181818181818 |
Instability index | 45.7022727273 |
Isoelectric point | 4.50567626953 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0423462678366 |
Amino acid sequence | MELPFSYSFTFLISLLSLYGHTLSSFLCNIQESSLGIWIGTPFL |
Secondary structure | LLLLLEELHHHHHHHHHHHLHHHHHHHHHHHHHHLLEEELLLLL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii |