NONHSAT140400

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT140400

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1870 nt

Genomic location

chr16+:8768474..8831330

Exon number

2

Exons

8768474..8768568,8829556..8831330

Genome context

Sequence
000001 GAGCAGACAC CCAGCGCTGC CGGAACTCGG GGCGCGCATC CCGCAAGTCG GAACCCGGCG GATCGGATCC CGCAGATCGG 000080
000081 AGACGGGGCC TGGAGGGTGG CAGCACGCAA AGGGTGTCCC TGTCCCTCAA GGGGTCATGG CCTCCATGTT GCTCGCCCAG 000160
000161 CGCCTGGCCT GCAGCTTCCA GCACAGCTAC CGCCTGCTGG TGCCTGGTAA GCCCCGGGGG TCTTGATAAG AACTGGTACT 000240
000241 AATGGAAGAT ACCATCCAGA CTAGGGATTC CTGGGCTGGA AGAGCCCTTG GGGATAAAGG GACCAGCCAG TGAGTGTTTC 000320
000321 TGGGACTGTC CCACtgtatt agtctgttct catgctgcta ataaaggtac acctgagact gggtatttta tgaagaaaaa 000400
000401 gaggtttaat ggtctcacag tttcatatgg ctggggaggc ctcacaatca tggcggaagg tgaaggagga acaaaggcac 000480
000481 gtcttacatg gctacaggca agagagcatg tgcaggggaa ctcccgtttg taaaaacatc agatcgtgtg agacttactc 000560
000561 aattgactat catgagaaca gcatgggaaa gacccacccc catgattcaa ttacctccca ctgggtccct cccatgacgt 000640
000641 gggaattatg ggagctatga tttaagatga gatttgaatg aggacacagc caaaccacat caCCCACTAT CCATAAAACT 000720
000721 GTCACCATCG CCACCTCCTT TCTCTCTCCC ATCTCTGTCA TATGATCCTG TCCCAAGTGC CTCGGTCTGA TGGGATTGGA 000800
000801 TCCACCCTGG AGCCACTCTG CCTGCAGGTA GGCGGTGGCC TCCACAGCCA GATGGCCCCA GGCCATCTCT GCAGGGACCG 000880
000881 CTGGGGAAAA CACACATCTG GGATCGCTGC TAAGGAACAA AGAAAGCCAT AAGCGACTCT GAAATTGACC TAGAGCCCAG 000960
000961 CTGTGCTTCA GGGTCACTGG ATCACTGGAT GGGAGGCACC ATCTTAGGAA TGTCTCACCC CCACTCTGCC CCACACCCAT 001040
001041 GGCCACTTGC ACTGGCTCCT TCTTCCTTCT GTTTGACGTC TTTGAGACCT Ccctcccaat agtcccatga gggagggagg 001120
001121 ctcaagtgaa tcctatttta caggtgagag aactcaggct tagagaagca aagccatttg cccaaggtca cacagccaCT 001200
001201 TGCAAGCAAC TCTGTCCGGC TCCAATGCTA ACTACTCCTC CGTGTGCCTC CATGTGGCTC TGGAGACAGA GCCGCCAGCA 001280
001281 GGAGCCTCCC TTCACATGCC CCGAGAGTGG CCTCCTGCAG AGATATAAAG TGCCTGGCTC GGGGCTGGCC ATGAAATAGG 001360
001361 TTCAGAAAGA CCAGTGAGCC TCCAGCCTGT CCCCAGCTCT CTCACAGCCC CTGTGCTTGT CATCATGGTG TCCCTTGTTG 001440
001441 GCAGGCCTTA CTGCCTTCTG AAGACAAACT GCTAGCCGTG TCCTTGGTCT GCATGTTGAA TGCTGGTGTG TATGTCCTGG 001520
001521 GTGGCATAAA CAGTAGGAGC GTTCGCCCCT CCCCAAGGAG TATGAGTAGG CTTTAtttta aaataaacat cttggccggg 001600
001601 cgcagtggct cacaactgta atcccagcac tttgggaggc gaggtgggca gatcacctga ggtcaggggt cgagaccagc 001680
001681 ctggccaaca tggtgaaacc ccgtctctac caaaaataca aaaattagcc aggtatggtg gtggatgcct gtaatcccaa 001760
001761 ctactcagca ggctgaggca ggagaatcgc ttgaatccag gaggtagagg tggcagtgag ctggatcgtg ccactgtact 001840
001841 ccagcctggg caacatcgag gctctgtctc
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Predicted Small Protein

Name NONHSAT140400_smProtein_761:931
Length 57
Molecular weight 6006.8798
Aromaticity 0.0178571428571
Instability index 51.8482142857
Isoelectric point 9.38189697266
Runs 7
Runs residual 0.0282982045277
Runs probability 0.0253236429707
Amino acid sequence MILSQVPRSDGIGSTLEPLCLQVGGGLHSQMAPGHLCRDRWGKHTSGIAAKEQRKP
Secondary structure LEEEELLLLLLLLLLLLHHHHHHLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -