NONHSAT140409
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140409 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
561 nt |
Genomic location |
chr16-:8874241..8891499 |
Exon number |
3 |
Exons |
8874241..8874618,8875150..8875301,8891469..8891499 |
Genome context |
|
Sequence |
000001 TTTACTTCCG GCAGCAGGTG GTGGGGCCAT GTGGAAATGG CTTCTTTACT TGAAGTCTGC TAAGATGTCA CTGAAAATAT 000080
000081 TGAGGAACAG GTGAGCGTGG TGATCCCTGA AGACCAGCGT GGGACGGAAA CGAATGGATT TGTCACCACA GCCACCCAAC 000160 000161 ACCACACCTG AAAGAGGCAG GAGagatgga gtctcgcgct gtcacccagg ctggggtgca gtggcaaccc agtctcactc 000240 000241 actgcaacct ccacctccca ggttcaagcc attctcctgc ctcagtctcc caagtagctg ggatcacagg tgccgccacc 000320 000321 acggccagct aatttttgta ttttcagtag agatgaggtt ttgccccgtt ggccaggctg gtctcgaact cctgacttca 000400 000401 gctgatctgc ccacgtcggc ctcccaaagt gctgggatta caggcgtgag ctactgcacc cggccTGTTT ATGCctttga 000480 000481 gaccacgttt tctcattttt aaaatggagg ttgattatcc ctgcccttct gaggctgctg caaggattct gtaagatggc 000560 000561 a |
Predicted Small Protein
Name | NONHSAT140409_smProtein_185:331 |
Length | 49 |
Molecular weight | 4830.2895 |
Aromaticity | 0.0208333333333 |
Instability index | 40.8291666667 |
Isoelectric point | 6.80462646484 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0366795366796 |
Amino acid sequence | MESRAVTQAGVQWQPSLTHCNLHLPGSSHSPASVSQVAGITGAATTAS |
Secondary structure | LLLHHHHHLLEEELLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |