NONHSAT140498
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140498 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1316 nt |
Genomic location |
chr16-:10445297..10446612 |
Exon number |
1 |
Exons |
10445297..10446612 |
Genome context |
|
Sequence |
000001 ggaggctgaa gcaggagaat cgcttgaacc cgggaaaggg agattgcagt aaaccaagat cgtaccacca cactccagct 000080
000081 tggatgacag agcgagactc tgtctcaaaa aaaaaaaaaa aaTTCATGTG ACAattgtat gattccactt atatgaggta 000160 000161 cttagaatag ttaaattcac agagacagaa agtagaacag tggttatcag aggccaaggg gatggaggag ctgctcacgg 000240 000241 cgagttattg cttcaagggt acagagtttc agtttgggat gataaaaaat tctggagctg gttgggagtg atgattgcac 000320 000321 aacagtgtga atgtacttaa tgccactgaa ctgtacacct aaaatggtta aacagtaaat tttatgtcaa atatatttta 000400 000401 ccataatAAC ATTTTTAAAA ATTGATGGGA AATATTATTT TGCAATGGAA TAGTTGCAAG TTGTTTGTTA ATTGTTCAAA 000480 000481 CCACCTTGGT ACTTGCTCAT TTGGTTGAGG GAGATTAGAG GGAAGAAATT GCAAAAGATG TTTTGCTAGT GTGTACTACA 000560 000561 AGATTTCAGA TGACTTGTTG CCTGGTATAG TAGCTGCACT TCTTTAAACT TTGCTATACT GTATATACAG ccaggaatgt 000640 000641 ttttctcaag gacatggcag ctacctcttt gaaataaaat cttcaaggga gatagttttc ctaactctta cttttgtggg 000720 000721 agggtaggag tctaacttca gtgggtatct tgctccaagc tgcaaaactg cctcctgtct tagagatatg aaacatctgt 000800 000801 ttcttctttg gataaagcca actagcaaac aaagaccacc cccaattaac agatacattt aagatggact atatgtgatg 000880 000881 aatgatgctg tcaactcctc ttacttgggg acaagttatc atttatcata agaatatgta tgtcatagat tgcatctgct 000960 000961 tgacatcaca aaatatacca ggaaaaaagg gtgaaatgta tccctttctt ggttgggtgc ggtggctcat gcctgtaatc 001040 001041 ccagcacttt gggaggcaaa ggtgggtgga tcacctgagc ccaggagttc cagaccagcc tgggcaatat ggtgagaccc 001120 001121 cccaccgtct ctacaaaaaa tacaaaaatt agctgggtgt gatggcatgt cccctgcact cccagctcct tgggaggctg 001200 001201 aggtaggagg atggattgag cctgagaggt caagactgcg gtgagctatg tgattgtacc actgcattcc agcctgggtg 001280 001281 acagagtgag accctttctc aaaaaaaaaa aaaaaa |
Predicted Small Protein
Name | NONHSAT140498_smProtein_881:1114 |
Length | 78 |
Molecular weight | 8848.4555 |
Aromaticity | 0.12987012987 |
Instability index | 72.8961038961 |
Isoelectric point | 9.13824462891 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0371940568019 |
Amino acid sequence | MMLSTPLTWGQVIIYHKNMYVIDCICLTSQNIPGKKGEMYPFLGWVRWLMPVIPALWEAK VGGSPEPRSSRPAWAIW |
Secondary structure | LLLLLLLLLLEEEEEELLLEEEEEEEELLLLLLLLLLLLLLLLHHHHHHHHLHHHHHHHH LLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |