NONHSAT140554
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140554 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1076 nt |
Genomic location |
chr16+:11283169..11318739 |
Exon number |
4 |
Exons |
11283169..11283302,11290060..11290164,11290476..11290530,11317958..11318739 |
Genome context |
|
Sequence |
000001 ACAAAAAAAA CCGCCTGGCT GGATGTGGCT GGCAAGAAGA TGGCCGGAGC TGCAGGTGAC GAGTGATCAA GAGGAGCCCA 000080
000081 TGGCAGTGGG GACAGGTCAC AGCTGAAGTG GGTGACCTGC AACATGTTCA GCAGgtcact ttccctgggg gtagtcagct 000160 000161 gtcgtgtcac gaggacattc aaacagccct gtgggaagac ccatgtgaca aggagctgag gcctccagca aacagccaga 000240 000241 tgaagaccat gaggcacaga gaggtttgtt aacttgccca aggccaaaca gctggtgggg aagctgaggc ccagagaggt 000320 000321 gagtggcatg tccgaagcag cccagcgcag ggtgcgaggt aggcagggct gggcccccgg gccttccCTG TGAACCATCT 000400 000401 GCCCGCCGGT TGCAGGAGGC AGTTCCTGGA AAGCAAGCGG GCCGAGTTCC TCACAGAGAT CAGAAGAGCA ACAAGATCTC 000480 000481 CAGGCCAGGG CAGAGGTCCC CGCCCTGGAT GCTGGTGACA CTTCCCCTGG GCGGGAGGGG CTGGGAGCAT GCAGATCTCA 000560 000561 GCCCTGAACA GCCTGTCCTC TCGCCTCGAG GTTCTTGGTA GGCTGGGAAC AGCCTGTCCT GCTGAGCTTC CTGTCACCTC 000640 000641 TCTAGCTGCC CACACGCCGC ACAGCTGCCA CCGCCGGCCC TGGCCCGGGA GAGGGGGGTC TCTGGGGATC TTAGCAGGCC 000720 000721 ATGGTGGGGG TGTCTTGGGG CCAGCCTGAA CTGAAAGACC ATCACAGCTT GCAAGCCACC TCCCTGCTCT GTTGCTGGCT 000800 000801 CTCCTTGAAG ACAAGTGTTT TTCAATTAAC CAAAGCGGTG CATGGCAATG TGATAGGGGA ATGAAACACA GCAACAGAAT 000880 000881 CAATGCCCCA CGCTGGGCAA TAGCCGACTT TCTGTTCGCT CCCATCCCTT CCTTCCCTCC CCGCCTCCTT CCCCTGCTCC 000960 000961 Ttccattcca caaacattta ttgagcaccc gctgtgtgcc agccactgtt ctaggccctg aagacacaga agtgaacaaa 001040 001041 aaaaaagagt ccctgtgcac atcctggagg gacttt |
Predicted Small Protein
Name | NONHSAT140554_smProtein_548:748 |
Length | 67 |
Molecular weight | 6647.5903 |
Aromaticity | 0.0151515151515 |
Instability index | 56.2121212121 |
Isoelectric point | 10.2962036133 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0338027102734 |
Amino acid sequence | MQISALNSLSSRLEVLGRLGTACPAELPVTSLAAHTPHSCHRRPWPGRGGSLGILAGHGG GVLGPA |
Secondary structure | LLEELLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLL LLLLLL |
PRMN | - |
PiMo | - |