NONHSAT140670
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140670 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2404 nt |
Genomic location |
chr16+:14244690..14247092 |
Exon number |
1 |
Exons |
14244690..14247092 |
Genome context |
|
Sequence |
000001 TCAACTTTTT CTTCTAATGT CATGACTTTT TTCTGCTTCT TGGGAGCACC TCCAGAATCA CTAGTGGCAC TTCGTAGGAG 000080
000081 TCTCATTATG CAGAGCTTAA GGTACTGCAC TACACATGAT GAAAAATATG TGAGAACCTC AAGAGATTAC TTTTTACTTC 000160 000161 TATGTGCAAT TTCCTGGAGA GACAACTGCT CACGCGGAGA TGATGAACAT CACTTGGTGT TTTAAGCAGT ACTCGCAGCT 000240 000241 CTTGAGCTTC ACCACAATAG CAACAGGAGG TGACTACAAA ATTGTTACAG TAGTACAATA TCCACTACAG TTGATTTATG 000320 000321 TTGATTTACA TTGCTCATCT ATAAATGGTG CCACGTATGG TCTGTATGTG TATGTAAGTT TTGGTAAATT TTAACTTTTT 000400 000401 ATAATAGATT TGTGTATATT TTATGGTAGT AAATGATAAA AATAGACTAG TTTCCACATA TATTTTATAC ATTCACAACA 000480 000481 TACCTAACTT TTTCTTAATT CTTTTGATAT TTCTAGGCTA TGTGGTTCAT CTGAGCTTTT TCAAATTTTC ACACATCTCC 000560 000561 AAAAAATTTT GCAACACATT TATTGAAAAG AATCCAAATA TATGTGGACC CATGAAGTTC AAAGTCATGT TGTTCAAGGG 000640 000641 TCAACTGTGT TTTAATTTTT ACTAAGTCAG TGTGGCTTTT CAGAATTTTC ACCATGATGT TTTATAACTT AGCATTTCTT 000720 000721 TTGGTCGTCC CAGTAACTTT TGCTCCCATT TTCTACAAGT ATTTCTTTTT TAAAAAGGCA AAATGACATT CAGTTTCTTA 000800 000801 ATGTCTCACC ATGTACCTTC ATAACATTTG AAGAGCAGCT TATCTGATGA GTGCTGAGAG GGCAAAGGCA GTGGGCACTG 000880 000881 ATTTCCCATG AAGTTCATCT CTTGTTGGTA CTGCCAGTTC CCACAATCCT AGCATTCTCT GGGCATCAGT CAGTGTCTAC 000960 000961 AAAAAAGGAT TTTCAAATAT TAAAGCATGT GAAAAGACAA ACAGGCCAAA ACTCAGAGCT CTCTAGGGAC TATGACCTCC 001040 001041 AAAACAGACT CCATTCTGAC ATTTTCACAG GCTACTTGAA GGAATTCCAG CAGGGTTGTT CCATTTGGTA AACTCCTAAA 001120 001121 CAAACCCTCT GTCATCGAGG ACTGATTTAT AGAATTTTCT CCTTATGTGC TTGTTCTGAA GAGATTAAGA TAGTAGATAT 001200 001201 GGTTGCTGAG ACTCTTTTAA AAGTCATTTG ATATATATGA TAAGTACTAT ACAGAAGATT TTTGGTATTT TGAAGTAATA 001280 001281 AAACAGTTAT TTGTAATGTT TAAAGAGATT TTGTGTTCTG AGTTGTCTTC TAAGTTCTTT TTCTTTTTGA TTCCAGGAAA 001360 001361 TCTATGTCAT AATCACATCT CTAAATTAAG TTTTTTTCAT TATAAACCCA ATCATTTAAC AAAGAAATTG AATAAATTCA 001440 001441 GAAATTATCT TTGTATAAAC AAGTATGTTA AAAACATGTT TATGCATATA TATAAATATA TACATATGAT ATACATATAT 001520 001521 CATATGTTTT ACAATGACCT TTAGAATATG TGAAACAGAA ACAGTTCGGT TGTTATAGAA TATTCTTCTA TGAAATCTTG 001600 001601 GTGTAATGGC AGCTGTTTAG ATGATGCTGT AAGGTCACTA GAGGGGGTGG ATCTATAAGT TGTTTTTCAA TTAATCTGGA 001680 001681 TCCTCTTAAA ATATTTTATT GTGTATTTTT ATGCATTTCT TTTTTTAAAA AGAAGAATAT AATGCTAAAA ATAAAGGAGA 001760 001761 AGGGCAGAAC CCAAGAGATT TGGAGCCTGG AGAACTTAAG GAAATGGGTA GTTGGGATTT ATTTGGCTTG TAGTTGTCCT 001840 001841 TAACTGCTAA CAGCCTCATG GTGGTCTCAT CTGAAGTCTG TGAGTGGCAT GTATGAAATT CCAGGGTGAA CGGCATTCCA 001920 001921 CATTGGGAGG ACCAGGTTTG TTGGGGAATT TTTGTATGGT TTGTTTCCTT CTTCGTGTGT TTCTTTTTAA TCCTTTAAAT 002000 002001 GAATTCTTTA ACTGAATTAA CAGAGTTTTA ACTGCTAAAT AAAAGTCCTA TACAATCAAA AAATTTCTTA AGATTTGATA 002080 002081 TCTGATTCTG TTGTAGGAAT GTAATATATT TTGGGAATGA GTTTAAAAAT GGGACACAGG CAAGTAAATT GATTTATGAT 002160 002161 GCTTTCAACC AAGCTTCACA AAATTAGTAC TAAAAATAAA ATTCATGTTA TCATATTCTA ATAACCTGTC ATAAACCTAG 002240 002241 CATATTTTAG GTCTCCTTAG TGGAAAAAAA AGAAAGGAAA TGAAAGTGAA ATAATAAATT GCTTAATTGG TCAAAATTAG 002320 002321 TTATTGAGTT CTTGGCTGTA CTAGAGAATT GTGTGGCTCT TAATTGATGT TTAAAATATA AATAAAATGT GTATGCTGAA 002400 002401 AAAG |
Predicted Small Protein
Name | NONHSAT140670_smProtein_1295:1543 |
Length | 83 |
Molecular weight | 10255.1499 |
Aromaticity | 0.219512195122 |
Instability index | 56.9025609756 |
Isoelectric point | 9.54425048828 |
Runs | 9 |
Runs residual | 0.0261456023651 |
Runs probability | 0.0642112700936 |
Amino acid sequence | MFKEILCSELSSKFFFFLIPGNLCHNHISKLSFFHYKPNHLTKKLNKFRNYLCINKYVKN MFMHIYKYIHMIYIYHMFYNDL |
Secondary structure | LHHHHHHHHHLLLEEEEEELLLLLHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHH HHHHHHHHHHHHHHHLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTT TTTTTTTTTTTTTTTooooooo |