NONHSAT140686
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140686 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
613 nt |
Genomic location |
chr16+:14415688..14420207 |
Exon number |
4 |
Exons |
14415688..14415805,14416335..14416404,14417154..14417240,14419870..14420207 |
Genome context |
|
Sequence |
000001 gtttctttct ctccctcctc ctctctggca tccaggcctt aaagaggtag acttggcact accagtggcc tcagacaata 000080
000081 aggccaataa gcagagagga ggagaaatga aacatgaggg aaggcatcga gcttgaggaa gaggccccat tcatctccgt 000160 000161 accccaggcc ctggtacaca gcaggcagct ccaggcgggc acgcatcttt gttgtgttct ctgctgacta tatcctcagc 000240 000241 acctagaact gtgtctgtca cctaatagat gctcaATAAA CCTGCCAGTA ATTTCAGCAA ATGAAACGTG GAACACGTCA 000320 000321 AGGCCAGAGG ATGGAAAAGG CTCCAGTTTT GATAAAAGGA GGCCTGCTTG GCTTGGAATC CTCTCTCCTG CTGGTTGGGA 000400 000401 GATGCAAAGA TGTTTCCAGA GAGGGGCTGA TGAATTGAGG GGAAAGAAAT GAGCCCAGTA TGAGTCCCCT TTCAGGGCTG 000480 000481 AGCGTGTATA AAACCAAACA ACTTGGAACC GCTCCAAGAG AGGGGATTAA AGCAACATGT TATTCTGAGT GATTGCTTAA 000560 000561 TTTATTGAGC TGCGGCTGGA TCTGTAATGA AATACAGCCC TTGTAACTGA TAA |
Predicted Small Protein
Name | NONHSAT140686_smProtein_113:226 |
Length | 38 |
Molecular weight | 4108.7428 |
Aromaticity | 0.027027027027 |
Instability index | 70.6054054054 |
Isoelectric point | 4.97344970703 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0381911323088 |
Amino acid sequence | MREGIELEEEAPFISVPQALVHSRQLQAGTHLCCVLC |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHHHHLLLEEEEEEL |
PRMN | - |
PiMo | - |