NONHSAT140686

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT140686

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

613 nt

Genomic location

chr16+:14415688..14420207

Exon number

4

Exons

14415688..14415805,14416335..14416404,14417154..14417240,14419870..14420207

Genome context

Sequence
000001 gtttctttct ctccctcctc ctctctggca tccaggcctt aaagaggtag acttggcact accagtggcc tcagacaata 000080
000081 aggccaataa gcagagagga ggagaaatga aacatgaggg aaggcatcga gcttgaggaa gaggccccat tcatctccgt 000160
000161 accccaggcc ctggtacaca gcaggcagct ccaggcgggc acgcatcttt gttgtgttct ctgctgacta tatcctcagc 000240
000241 acctagaact gtgtctgtca cctaatagat gctcaATAAA CCTGCCAGTA ATTTCAGCAA ATGAAACGTG GAACACGTCA 000320
000321 AGGCCAGAGG ATGGAAAAGG CTCCAGTTTT GATAAAAGGA GGCCTGCTTG GCTTGGAATC CTCTCTCCTG CTGGTTGGGA 000400
000401 GATGCAAAGA TGTTTCCAGA GAGGGGCTGA TGAATTGAGG GGAAAGAAAT GAGCCCAGTA TGAGTCCCCT TTCAGGGCTG 000480
000481 AGCGTGTATA AAACCAAACA ACTTGGAACC GCTCCAAGAG AGGGGATTAA AGCAACATGT TATTCTGAGT GATTGCTTAA 000560
000561 TTTATTGAGC TGCGGCTGGA TCTGTAATGA AATACAGCCC TTGTAACTGA TAA
[back to top]

Predicted Small Protein

Name NONHSAT140686_smProtein_113:226
Length 38
Molecular weight 4108.7428
Aromaticity 0.027027027027
Instability index 70.6054054054
Isoelectric point 4.97344970703
Runs 5
Runs residual 0.0446317877511
Runs probability 0.0381911323088
Amino acid sequence MREGIELEEEAPFISVPQALVHSRQLQAGTHLCCVLC
Secondary structure LLLLLLLLLLLLLLLLHHHHHHHHHHHLLLEEEEEEL
PRMN -
PiMo -