NONHSAT140803

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT140803

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3907 nt

Genomic location

chr16+:16968845..16972751

Exon number

1

Exons

16968845..16972751

Genome context

Sequence
000001 TTCATATGTA TACATACGTG TGTGAATGCG TATGTGTGTA TGAAAAGATT ACCACCAACT CAAATGGTAC AGATATGTAT 000080
000081 GAAGAAACTC AAGATAAATA ATAGTAACAT TTTGATTATT GAGTTTCCTT ATAGTTATCT AAATTGTTCA AATTATTTTC 000160
000161 TCAAGCTTCA TGTATTTTCC CACTTTTAAG CAGGCAATAA CAGAAACTAT CTTAAAGATA ACACATTTAA ATTTACTGAC 000240
000241 ACACAGTAGG CACCTAATAA ATAGTTTAAA GAAAATAAGT ATAATTCTCA AAATTCAATA AAGATCTTGT CATTGTGGAG 000320
000321 ACAAAAAGAA CCACGCTTGG AGAGAAGCCA GAGATAGCTG AGAAGATGCT CACTCTGTCT TCTCCTTGAA AGAAAAGCCA 000400
000401 ACACAGATTT AAGAGGTCCA AAAATGATag agaggaagag agagagagag aaagaTTTTC AACCTGCTGC TTTTCAACCA 000480
000481 AAACATTGCA GCAAGGGCTG CAAGCCACAT ACGTGGAATA TACTGAGAAT TTAGCATCTG ATCATGAGCA AACTCAGAGA 000560
000561 CATGGATGGT CCTTCCTGCT ACTTCTTTGA GTTTGCAGGG CTTGGAGGCT GTAGCAGTGA GTGGTGCTGC TGTCCTAATG 000640
000641 TCCTGACTAT ACCGGGAGCC ACTCTTCGAT CATTCTTCTG TCCATTCAGA TGAGTAGAGA TGGGCTGCAT GAacggtttt 000720
000721 atccccagga tcaagtggag catctggcat ggaacagcca gccactcagt aagtgctggg tgaatgcata aatAagtaag 000800
000801 ggaatgagta aatgaagggt tgagtatgtg agtgagtgag tgaatgggtg agACAATGGA TGAATGAATA AATTTGCACC 000880
000881 CCAGAAGAAG CTCTGACACA GCTTTGAATT ACTCCTCCAG ATGCGAGGGG CTTTGTGGAG AGCTGTCCAT CATCCTTGCC 000960
000961 TGCCCAAGGA CAATGACTTC TCAGCTTTCA CCATGCATCC TGCAGCCATG GAGGGAAGCA AAATTAACTG GTCTCCATCA 001040
001041 GCCTCCCcat caaacatttg ctgagcaccc atcatgtgca aaatattgac taggaactgt gggagatggg aagaattctg 001120
001121 gaaactccta actctcaagg aatttgcaGG GTTATCAGAC AGTTGCCACA CAAAGACATA AAAACATCCC CTGCTAAAAT 001200
001201 AAAGACCACG CCAGATATGT GCTGTAGGTA TTCACCCCTG CAGGAACTCT GGGGAAAATG GGGCAGGAGG AGTCACCCTT 001280
001281 GGATGTCACA AATGGCTCTC CAAAGGAAAT AGAACAACAT CGCagcatga attctgaagc cggcccacct gcctgccttg 001360
001361 aattacagct tccaccagct gtctggcctt ggacaaacta cttaactctc cacatctgtc aaatggggat aataatataa 001440
001441 caatccccca atattgtgag gatgaaataa gctaatactt aggaaaagct tggaacagtg cttggcacgt cttaagtgTG 001520
001521 ATATGTGTGA GCTCCTTCCT TGATTCTCAT TCTGACTTGA AGAGGATTTT TAGAGGGGAG ACCCAGGGAA cagtggggca 001600
001601 gcctagacgg gtggaaagtg ttatgctgga ggcttaacct aacctggttc aaaacctggt tctgctattt ctaccagtgt 001680
001681 gaccttgact taaactctcc aaagctcagt tcctcactta taaaatggta ataacaaaac caatttcATT GAAAACGTAT 001760
001761 GCTAACGATG CCATGATAAA TAATAGTTAT TATTAAAGAG AAACACAGTA AAGAAGTTCC CAGAGGGAGG TGAATAAATT 001840
001841 AAGCATGATG ACGTGCCTTG CTACTTCCCC ATCTTTCTCT TCTTCCCCCA GATTTGTTCA AGGTCTCATC ATTACTGGTT 001920
001921 TGCATTTCTA TTTTAATCAT GTTATAGGTT TACAGTATTT TTCCCCCTGC ATCTTTATAT GCTATAATTT GGGTACTATT 002000
002001 TTTACACAAC GAAGCCATTT TTAACCGAGA ACAGATTCAA TTGTCTTTCA GCATATATCA TTGTTTATCT TAATTAATGC 002080
002081 TAAAATATTC TTAGGGGGAA AAACACATCC CACAGAGTAT TATGCGAAGA AACTTAGCAT TCATTTTTGC CTCCCTCTTT 002160
002161 TCTGGCATAT CAATTTATAA AGGTTTTAGC ATCCTGTTAT TTCAATGACA ATAATGCATG CTCTTAAACG CAGACACCCA 002240
002241 TCTGTGGGAA GCAAGTCACA GGGTGTCAAC AGCAGCAAGG TGTGTGTTGC AGTGGAGGTG GAGGATTGAC AGCTGGAAGA 002320
002321 AGAAGGGGAT TTTGCTGGTG AGAATAATGC CAAGTGAAGT CATAGGCTTT GTCTCTGATT GATCCATGGA AACATTCCTT 002400
002401 GAGTAGAGCT GAATCTAGCT AGATTCCATG CTTGGAGTCT TTCTTAGTAA GGCTACTACT ATAAGCACAG ATGATGGAAA 002480
002481 ATGGAtgatg tttttattca tcatccattc tctttccttc aaataagatg ccccatgcac ctctgaggga atgacccttt 002560
002561 acacactcaa cctaagtttt ttgcctctcc ctccagctct agggtgggca tgtgatatag aactgaccaa tcaatatcta 002640
002641 ttatctttct ggccacagtg attgggcaag ggatagccat gtgacccaat cagagccaag agactcagtt ttgaggcttt 002720
002721 agatagaacc actgggaaag agggttctct ttctactggg atgctgacct ggcaggaata ttacccagag ctgcctgtga 002800
002801 ccatctttac tatgaaaagg ggagagcttg ccaaagaatg aagctgtatt atagtctgtt ctcatgctgc taataaagac 002880
002881 atacctgaga tggggtaatt tataaaggaa agaggtttaa tggactcaaa gttccacatg tctggggagg cctcacaatc 002960
002961 atggcagaag gcaaacgagg agcaaagtca cgtcgtacat ggtggaaggc aggagagcgt gtgcagggaa actccccttc 003040
003041 ataaaactat cagatctcgt gagacttacg agaacaacac aggaaagacc cgcccccatg attcatttac ctcccactgg 003120
003121 gtccctccca tgacacatgg gaattaaggg agctacaatt cgagatgaga tttaggtggg gacacagcca aaccatatca 003200
003201 gaagccaata tgaaagaaaa cagaactgag agatggaggc agactcttga tgacaactcc tggaccctgg atcaattttt 003280
003281 gtttaaagcc agtctgcact ctgcatcttt gatgtaaacc aatgtatttc ctttatttgt ttgtttaaac taaattaagt 003360
003361 catttgtaat ttaaagagtt cagaGAGGTG CCGTGTTTCA GTAGGGAACT GTAAAAAGCC AGGATATTCT GTAAATTAGA 003440
003441 AGGGAATAAT GTGGTGTTGA CCACATCTGG GAGAATGTGC ATCTGAGGGT GTCTTGCATG CCAAACTCAC TTGTCTTCCT 003520
003521 AATCAAGCAA TAGTTTGGTA ACTGAGAAGT TCCAAGTAGC CTTTAAGTCA CACAATCATA CTAGAGGAAC TCCTAAGAAC 003600
003601 CTGGGTGACA TTGTGATATA AAATGTGGAA CTTCACTAGG TTATGCAAGA ACCTCTGAAA AGGGTTGATA GGAAGGGTGT 003680
003681 ACGTTAGGTG TGTAAAGAAC TAGGTGTGGG GGAACTAACT AGTACAAAAG GGATCTGGTG AATTTGGATT CTACCCTACT 003760
003761 CGAGATGATG TTGGAGGGCT CTGATCAAAG TAGGGGTTTG GGGGCAGAAT TATGACAAGT ATCTATAGGA AGTCACTATC 003840
003841 TTTTATTAAA AATTTGTTGT GAACCtgtcc tcactcatag ttgggaattg aacaatgaga acacatg
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Predicted Small Protein

Name NONHSAT140803_smProtein_1844:2023
Length 60
Molecular weight 6741.813
Aromaticity 0.186440677966
Instability index 51.2476271186
Isoelectric point 8.63494873047
Runs 13
Runs residual 0.0758824444099
Runs probability 0.0317421493892
Amino acid sequence MMTCLATSPSFSSSPRFVQGLIITGLHFYFNHVIGLQYFSPCIFICYNLGTIFTQRSHF
Secondary structure LEEEEELLLLLLLLHHHHHHHHHHLLEEELLEEEEEEEELLEEEEEELLLLEEEELLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
PiMo ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiii