NONHSAT140853

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT140853

Source

NONCODE4.0

Same with

,

Classification

sense

Length

581 nt

Genomic location

chr16-:18809034..18812866

Exon number

3

Exons

18809034..18809366,18810023..18810156,18812753..18812866

Genome context

Sequence
000001 GTGGTTGGTG TGCGGGTTTC GGTTGGAGGA CTCGTTGGGG AGGTGGCCTG CGCTTGTAGA GACTGCATCC CCGAGACGAT 000080
000081 GGCGGAGGGA GATAATCGCA GCACCAACCT GCTGGCTGCA GAGACTGCAA GTCTGGAAGA ACAGCTGCAA GGATGGGGAG 000160
000161 AAGTGATGCT GATGGCTGAT AAAGTCCTCC GATGGGAAAG AGCCTGGTTT CCACCTGCCA TCATGGGTGT GGTTTCTTTG 000240
000241 GTGTTTCTGA TTATCTACTA TCTAGATCCA TCTGTTCTGT CCGGCGTTTC CTGTTTTGTT ATGTTTTTGT GCTTGGCTGA 000320
000321 CTACCTTGTT CCCATTCTAG CGCCTAGAAT TTTTGGCTCC AATAAATGGT AGGTAGCATA ATGATTTGGC AGTCTCATTT 000400
000401 TTGTGTAGTT ACTGAACTTG GTGGCTGTGA TTAGTATGCT GTAAATAAGC AGAGATAATT GTCTAACCAT CAGACACCTA 000480
000481 AGCATTAGAT TTATTGCTTT TATGTGAAGA ATATTGTAAC TGATTTGAAT ATAAACTATG AATTTTCTGT ACTCCATAGT 000560
000561 TCTTTTATGG TAAATGCACA T
[back to top]

Predicted Small Protein

Name NONHSAT140853_smProtein_191:319
Length 43
Molecular weight 4693.5185
Aromaticity 0.166666666667
Instability index 41.719047619
Isoelectric point 8.90753173828
Runs 9
Runs residual 0.038125376733
Runs probability 0.0469292822234
Amino acid sequence MGKSLVSTCHHGCGFFGVSDYLLSRSICSVRRFLFCYVFVLG
Secondary structure LLLEEEELLLLLLLEEEEEHHHEEEEEELLLEEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToo