NONHSAT140853
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140853 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
581 nt |
Genomic location |
chr16-:18809034..18812866 |
Exon number |
3 |
Exons |
18809034..18809366,18810023..18810156,18812753..18812866 |
Genome context |
|
Sequence |
000001 GTGGTTGGTG TGCGGGTTTC GGTTGGAGGA CTCGTTGGGG AGGTGGCCTG CGCTTGTAGA GACTGCATCC CCGAGACGAT 000080
000081 GGCGGAGGGA GATAATCGCA GCACCAACCT GCTGGCTGCA GAGACTGCAA GTCTGGAAGA ACAGCTGCAA GGATGGGGAG 000160 000161 AAGTGATGCT GATGGCTGAT AAAGTCCTCC GATGGGAAAG AGCCTGGTTT CCACCTGCCA TCATGGGTGT GGTTTCTTTG 000240 000241 GTGTTTCTGA TTATCTACTA TCTAGATCCA TCTGTTCTGT CCGGCGTTTC CTGTTTTGTT ATGTTTTTGT GCTTGGCTGA 000320 000321 CTACCTTGTT CCCATTCTAG CGCCTAGAAT TTTTGGCTCC AATAAATGGT AGGTAGCATA ATGATTTGGC AGTCTCATTT 000400 000401 TTGTGTAGTT ACTGAACTTG GTGGCTGTGA TTAGTATGCT GTAAATAAGC AGAGATAATT GTCTAACCAT CAGACACCTA 000480 000481 AGCATTAGAT TTATTGCTTT TATGTGAAGA ATATTGTAAC TGATTTGAAT ATAAACTATG AATTTTCTGT ACTCCATAGT 000560 000561 TCTTTTATGG TAAATGCACA T |
Predicted Small Protein
Name | NONHSAT140853_smProtein_191:319 |
Length | 43 |
Molecular weight | 4693.5185 |
Aromaticity | 0.166666666667 |
Instability index | 41.719047619 |
Isoelectric point | 8.90753173828 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0469292822234 |
Amino acid sequence | MGKSLVSTCHHGCGFFGVSDYLLSRSICSVRRFLFCYVFVLG |
Secondary structure | LLLEEEELLLLLLLEEEEEHHHEEEEEELLLEEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToo |