NONHSAT140923
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140923 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
856 nt |
Genomic location |
chr16+:20420868..20423527 |
Exon number |
2 |
Exons |
20420868..20420987,20422792..20423527 |
Genome context |
|
Sequence |
000001 GAAGTTCCCT GTGGGAGGCT GTTTTCTGAG GGAGCTGAGT GTTTACAGCC ACTCAGCCCT GCTCTGCTCA GCTGAAGCAG 000080
000081 AAAACAGAGA CCTTTTGCAT TACTTTGGTT CAAGAGCAAG ACAGGAGGCG ACTGCATGAG ACCATGGCTG AGACACCTAG 000160 000161 TCCTCCAGGC ACTGAGGAAC TCCAGGGCAT TCTGTGGGTC TCATGGGAAG CCAGCACCTC TACCTGTTCC TCAGAAGATC 000240 000241 GTGGCCACCT GGGAAGCCAT CAGCCTGGGA AGGCAGCTGG TGCCTGAGTA CTTCAACTTC GCCCATGATG TGCTGGATGT 000320 000321 GTGGAGTCGG CTGGAAGAGG TGAAGCCTGT TCTGTCCTAG AGTCCATCTG GGGCATCTGA GGCTGCCCTC ATGTACCACA 000400 000401 ATGAGACTCA AGGCTCCAAG CATGTTGATG AGGAAATTTG GACCTGGGAA TTTTGCTAGT TCTAAAATGT AAACTGTTGG 000480 000481 CATTTGAGAC TTAGGAAAAA ATTCTGAGTC AGTGTTGTGA GCCTTAGACA TGCTTGTTCC TTCTCTGAAG TGTCCTGCAT 000560 000561 TCTTGAGCCC Aaatcacaca gtgagacagt tatgtccctt ccgattccct tccagttgtt catcaactga aggaggaagt 000640 000641 tttgttttgc tgctactctg tctttgatgt ttttctctca ctgtcacgcc cttctcttct aaataaggaa agaaggccgg 000720 000721 gcgcggtggc tcatgaccat aatcccagca ctttgggaca ccgagaaggg cagatcacct gaggtcagga gttcgagacc 000800 000801 accctcacca acatggtgaa actccgtctc tactaaaaat aaaataaaaa aaaatt |
Predicted Small Protein
Name | NONHSAT140923_smProtein_143:286 |
Length | 48 |
Molecular weight | 4852.2026 |
Aromaticity | 0.0425531914894 |
Instability index | 61.0127659574 |
Isoelectric point | 4.68341064453 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0332727685668 |
Amino acid sequence | MAETPSPPGTEELQGILWVSWEASTSTCSSEDRGHLGSHQPGKAAGA |
Secondary structure | LLLLLLLLLLHHHLEEEEEEEEELLLEELLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |