NONHSAT141047
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141047 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
581 nt |
Genomic location |
chr16+:22103859..22122233 |
Exon number |
5 |
Exons |
22103859..22103972,22108180..22108266,22111515..22111814,22114796..22114850,22122209..22122233 |
Genome context |
|
Sequence |
000001 GCTGAGTTGC TTGGAGGAGC TTGGAGAAAC CAGAAGTGAG ATCCAGGAGA AGTAAGGCCC TGGAGTGCCA GGAGCCCTTC 000080
000081 TCCCAAAGAT GGAGAAATAA ATGAAGAAAT ACAGGAAAAT AAGCATTGGG TGTTTTGCAA TGGCTACACA AACTAGTCAT 000160 000161 GTCTTCCATG GTCAAGAAAA TATGTTTCTG GAAAACCATT GAGGCTGCAG GGGAGTGAGA CCCAGTCTTC AGATTGGGAG 000240 000241 GACTCTGAAG ACTGGCTTTC GGCTCACAGT TTAAAATGTC AGAAACTCAC CTTGGCTGAC CTGATAAGCC AGGGCACAGA 000320 000321 AGTGCTGTAA GTCTGAAGCT GTTCCCCGCA CCCCCCACAG CTGCAGTGAC ACATGCAACC CCCTGGGCCC GAGAGATCCC 000400 000401 CTCATAAGGC TTTGCTTCTT CAGGGAGGAG GGCACCAATG TCGTGCAGAA AATATGTTTC TCCACCCAGA TCATCCGCCA 000480 000481 TTTTGAGTCA AAGCTTTCTG ACACTATTGA AGTCTATCAA GAGAGAATTC AGTGGCTCAC AGAAAACAGC AAGAAGAGCC 000560 000561 TCATCGATGA GCAGCTGAGC C |
Predicted Small Protein
Name | NONHSAT141047_smProtein_437:577 |
Length | 47 |
Molecular weight | 5096.8658 |
Aromaticity | 0.0652173913043 |
Instability index | 108.147826087 |
Isoelectric point | 11.481628418 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.020163020163 |
Amino acid sequence | MSCRKYVSPPRSSAILSQSFLTLLKSIKREFSGSQKTARRASSMSS |
Secondary structure | LLLEEELLLLLLHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |