NONHSAT141168
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141168 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
943 nt |
Genomic location |
chr16+:24803011..24807689 |
Exon number |
4 |
Exons |
24803011..24803138,24804794..24804970,24805865..24806040,24807228..24807689 |
Genome context |
|
Sequence |
000001 CAAAAATGTG AACATGTGGA ACAAAAACGT CCCAAATGGC AACAGCCGTT CAGACCAGCA AGCACAGGTA CATCAGCTGC 000080
000081 TAACGCCTGC AAGTGCCATC TCAAACAAAG AGGCAAGCAG TGGCTCTGGC TGGGGTGAGC CCTGGGGGGA GCCTTCTACT 000160 000161 CCAGCCACAA CTGTGGATAA TGGTACTTCA GCATGGGGTA AGCCCATAGA CAGTGGTCCC AGCTGGGGGG AACCCATTGC 000240 000241 TGCGGCATCC AGCACATCCA CGTGGGGCTC CAGCTCTGTT GGTCCACAAG CATTAAGCAA ATCTGGGCCA AAATCTATGC 000320 000321 AAGATGGCTG GTGTGGTGAT GATATGCCAT TGCCTGGAAA TCGCCCCACT GGCTGGGAAG AGGAAGAGGA TGTGGAGATT 000400 000401 GGAATGTGGA ATAGTAATTC ATCTCAAGAG CTTAACTCAT CTTTAAATTG GCCACCATAT ACAAAGAAAA TGTCATCGAA 000480 000481 GGGTCTGAGT GGCAAAAAAA GGAGAAGGGA AAGGGTGTGT AGCCTTTTTA CTCTTTCTCC TTTGTTTCTA CTAGTAAAAA 000560 000561 TCTTTAGAAA GCAACTGcaa acatttattt agcctctgct gtgtgccagg tactgtgctt ggtgctgggg attcaaatac 000640 000641 actaagatat gagtttcacc tttcgggagc tcacagtcta gtatgggGCA TTAGGAGAGC TTCATAGAAG TGTCAGCTTG 000720 000721 AATTTGGAAG ATGCTTGGGA TGGGATGTGT TAAGGAAGAT AGTAGCCCAA CATAACCAAA ATGTAGAATT TTTAGGAAGA 000800 000801 AGTGACAAGA GATCTGGCTC TGTAGTTGAG GCAGATTGTA GTGTCTTCAG TAGCATGCCA AGGAATTTGA ACTTTATTTT 000880 000881 GTGTAAAATA TGGAACCAAC GAAATTGAGT AGAAAACAAC ATCAGTGGGG TTTTTAAATT ACT |
Predicted Small Protein
Name | NONHSAT141168_smProtein_323:445 |
Length | 41 |
Molecular weight | 4528.6148 |
Aromaticity | 0.025 |
Instability index | 57.31 |
Isoelectric point | 9.49786376953 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0427486309839 |
Amino acid sequence | MAGVVMICHCLEIAPLAGKRKRMWRLECGIVIHLKSLTHL |
Secondary structure | LLLEEEEHHHHHHHHHHLLLHHHHHHHLLEEEEEHHHHLL |
PRMN | - |
PiMo | - |