NONHSAT141433
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1037 nt |
Genomic location |
chr16+:27225933..27232405 |
Exon number |
6 |
Exons |
27225933..27226093,27226197..27226329,27227266..27227310,27230282..27230367,27231714..27231806,27231887..27232405 |
Genome context |
|
Sequence |
000001 AAGCAGGGAA CTAGAGCAGC CCAGCCAACC AGACTTACCG GCCCTGTCTG CAAAGCTGCA CAGCACTGTG tatgagccac 000080
000081 acagccttga gcagggagcc ccacctctcc atgccggttc ctcatcagtg aagctgggga tgacagtcct tgtctctgca 000160 000161 cTTTGGAGTA TATCCAGGAG ATCGCTGGCT GCCGAACTGT CCCAGTGGAA GTTGGTTCGA GGTACACAGA TGAGGAATGG 000240 000241 TCCCAGACCC TCATGACGGT CAACGAGTTC ATCAGCAAAT ACATCGTGAA TGAGCCAAGG GACGTCGGGT ACCTTGCTCA 000320 000321 GCACCAGCTC TTTGACCAGA TCCCGGAGTT GAAGCAGGAC ATCAGCATCC CCGACTACTG CAGCCTGGGC GATGGGGAGG 000400 000401 AGGAGGAAAT CACCATCAAT GCCTGGTGAT GGGGAGGAAG TACATCCGGC TGTATTCCCC GCAGGAGTCA GGGGCTCTGT 000480 000481 ACCCTCATGA CACGCACCTT CTCCATAACA CGAGCCAGGT TGACGTGGAG AATCCCGACC TGGAAAAGTT CCCCAAGTTT 000560 000561 GCCAAGGCCC CATTCCTGTC CTGCATCCTG TCTCCTGGAG AGATCCTGTT CATCCCGGTG AAATACTGGC ATTACGTGCG 000640 000641 GGCTCTGGAT TTGAGCTTCT CGGTCAGCTT CTGGTGGTCG TAGCCAGGAT AGGAGCTGAA AGGGCCTGAC ATGCAGACAG 000720 000721 CATTCATCTG TTCACTAATT TCCTGGGTCC TGGAATCTAT AGAGACAAGC AGGACTGAAC CTGTGTCCTG AAGAGCCTTC 000800 000801 ACTGCCCAGT GGCAGCCCTG GGGGGCTGAG CTCCAGCACT GGACAGGCAC AGAGCAGGGG CTGCCCAGGA AGGAGCACAC 000880 000881 TCCAGGCCAG GGGTGCATGG CAGAGGAAGG TGGGGAGAGC CCAGAAGGAC ATTGCAGACA GACAGCCTGC ATGGGGACTC 000960 000961 TGGCATCAGA AAGCCGAATG TTTTTGGGAA ACGGGTGGGT CACACAGGCA GGGGTGAaac atgggctctg aggttgg |
Predicted Small Protein
Name | NONHSAT141433_smProtein_428:682 |
Length | 85 |
Molecular weight | 9830.1745 |
Aromaticity | 0.166666666667 |
Instability index | 51.2273809524 |
Isoelectric point | 6.89410400391 |
Runs | 17 |
Runs residual | 0.0683955110707 |
Runs probability | 0.0271101551378 |
Amino acid sequence | MGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL FIPVKYWHYVRALDLSFSVSFWWS |
Secondary structure | LLLEEEEEELLLLLLLLLLLLLEELLLLLLEEEELLLHHHLHHHLLLLEEEEEELLLEEE EEEEEEEEEEEEELLLEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHH HHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTT TTTTTTTTTooooooooooooooo |