NONHSAT141438
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141438 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
565 nt |
Genomic location |
chr16+:27280167..27295975 |
Exon number |
4 |
Exons |
27280167..27280477,27280992..27281126,27292857..27292956,27295957..27295975 |
Genome context |
|
Sequence |
000001 ACTTCCGGTT CTCCGTTTGC GCCATTGCCC TGGTGGTTCC GCCTCGTGGG TTAGATCCCA AATTACGCCC GCTCTCGATC 000080
000081 CTTAATAATG GGAAGGGGCT TCCACTTGTC GCCCTCCGCC TCCTGCACCT CAGTGACTTC CCTGACCAAG GAGGAAGAAT 000160 000161 TGGCGTGCAG CCTGGGCTTC CCTCAATGGC CACCATTCCG CTGGCACAAT GTAGTGCCCT GCCCCGGGCC TCAGTTTCCC 000240 000241 CATCTGTGGA ACTGAGTGTG GCCTCGACGT CAAAAATGTG GACTCTGGTc cggtcgcggt ggctcacgcc tGGATTGTGA 000320 000321 GAAAGCAAGT GAAATTACTC GTGGAAGTGA ATGGACTGCT TTGAGTCTTC AAGGCGTTAA TTTTCCAAAC GTTTGAATTC 000400 000401 TATCCCTGGT CTGAGAGCTA GGGATGCAGC CTAGCAAGGG AAACAGcagc ctcagcaccc cctgggagct cgagacatct 000480 000481 aaggagttga ctgaggcccc tccctgacat actgaagcgg aatctgcatt ttagcaagat ctgcaggtag tggaatctac 000560 000561 cacat |
Predicted Small Protein
Name | NONHSAT141438_smProtein_185:319 |
Length | 45 |
Molecular weight | 4700.5054 |
Aromaticity | 0.0454545454545 |
Instability index | 61.4159090909 |
Isoelectric point | 10.7630004883 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0394021472454 |
Amino acid sequence | MATIPLAQCSALPRASVSPSVELSVASTSKMWTLVRSRWLTPGL |
Secondary structure | LLLLLHHHLLLLLLLLLLLLEEEEELLLHHHLLLHHHHLLLLLL |
PRMN | - |
PiMo | - |