NONHSAT141634
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141634 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1313 nt |
Genomic location |
chr16+:29819741..29822388 |
Exon number |
2 |
Exons |
29819741..29820062,29821398..29822388 |
Genome context |
|
Sequence |
000001 CCTTCTTCAA GGCCTCATCA TGTCACTCCC ATTTCCTACA GATCAAAGAT CCCCAAGGCT CTGATTCCTT TAATCTCTTG 000080
000081 CTCCCCCCTC CCCAGCCCAC CAAGCTTTAA CTCTCCTGTG ACACCCCCCA CGCCCCTCCC CCCTCCTCAG AAATGTGAGG 000160 000161 CAGCTTTCGC CACGAAGGAT CGGCTGCGGG CGCACACAGT ACGACACGAG GAGAAAGTGC CATGTCACGT GTGTGGCAAG 000240 000241 ATGCTGAGCT CGGCTTATAT TTCGGACCAC ATGAAGGTGC ACAGCCAGGG TCCTCACCAT GTCTGTGAGC TCTGCAACAA 000320 000321 AGGTACTGGT GAGGTTTGTC CAATggcggc ggcagcggca gcggcggcag cggcagcagc ggcagcagta gcagcCCCTC 000400 000401 CCACAGCTGT GGGCTCCCTC TCGGGGGCGG AGGGGGTGCC TGTGAGCTCT CAGCCACTTC CCTCCCAACC CTGGTGAGCT 000480 000481 CCAAGTTGGT TGCGGGGGAG AGGGGAGAAT GGAGTAGAGT CCCTTGGTAC AAGCTCCTCT CCCCCCTCTT TTCCCACCAA 000560 000561 CTCCTATTTC CCTACCAACC AAGGAGCCTC CAGAAGGAAA GGAGGAAGAA ATGTTTTCTT AGGGGAATTC GCTAGGTTTT 000640 000641 AACGATTTGT TTCTCCTGCT CCTCTTCTGT CAGACCTGAC CCCACACAAA CCTGTCCCCT CGGTTGTGTT GAAGTCCCCT 000720 000721 GGACAGTGGG CAGGGGTGGC AGAGGACACG AGCAGCCACT GCCCGTACCC CCTCTCCTCT CTGTAAGCCC ATGCCCTGTC 000800 000801 TTCCCAGGGA CTTGTGAGCC TCTTCCCTCG ACGGTCCTCT TCTCTCCTTC CAGTCCTCTC CCCCTGCTGT CTGCAGCCCC 000880 000881 TCCCCGGGGA GTTGGTGCTT TCTTTTCCTT TTTTTTTTTT TTCCAGGGGG AGGGAGGAGA GGAAGGAGGG GGATCAGAGC 000960 000961 TGTCCCAAAG AGGGAAAGCG GTGAGGTTTG AGGAGGGGCA GAAGCAGGGC CGGCAAAGGT TGTACCTTCA TAAGGTGGTA 001040 001041 TGGGGGGTTG GGGTCAGGCC CTGAACATCG TCCTACTTGA GAATCTGTCA GGGGAAAAAG TCAAGGGGAG CAGGAGGAAG 001120 001121 AGCCAGGAGG GCCAGAGGCA GAGAAGAGAT GGAGTCTTAG GGGCCAGGGT GAGCGAGGGG TCCAGGGCCT AGAGGTGCTT 001200 001201 CCTGGGGGCG GGGGAATGCA GCCAGTGTCC CCCTCCCCTC TTCCACCCCA GCTCCAGCCC TGGTCTTGTC TTTTCATCCC 001280 001281 TCTTCCCCAC GACAGAAGAA GTTGTGGCCC TGG |
Predicted Small Protein
Name | NONHSAT141634_smProtein_221:307 |
Length | 29 |
Molecular weight | 3033.3522 |
Aromaticity | 0.107142857143 |
Instability index | 69.6964285714 |
Isoelectric point | 4.64935302734 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0197668256492 |
Amino acid sequence | MSRVWQDAELGLYFGPHEGAQPGSSPCL |
Secondary structure | LLLLHHHHHHLLEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |