NONHSAT141860

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT141860

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

5489 nt

Genomic location

chr16-:31094758..31100949

Exon number

2

Exons

31094758..31096581,31097285..31100949

Genome context

Sequence
000001 ggcctcccaa agtgctggga ttacaggcgt gagccaccat gcccggccAG CATCTATAAT ATATGCTAAA CCTTACCCAC 000080
000081 AGCTGCCTCT GTCTTGGGGT CAGGGTTCTT GAATGGTCTG GGCCAGCCTG AGTTAGGAGT GGGAAGAGGA AGAGGAGGCA 000160
000161 CGCGCCAAAG TGTTCTTCCC GCCTGACCGA GTCCTCTGCG cctatgagga aggtgggcac cgctgtcacc ctgtttccca 000240
000241 ggaagccagc aggcccaggg agatactggg atttgccaaa ggctcacagc gagcaagcag cagTGGGTGC TGGCTCCTCA 000320
000321 CCACTCAGCC TGGCACACAC TGTCTCTGAG CAGACCTGGG AGAAGGCATG TGAAACCCAC CTAGCCCTGG CTGGAAGAGA 000400
000401 AGTGGGGGAG TGGAAATGAA AAGTGGGGAC TGGGAGGAGC TGCCCACGTG CCCTCCATGG TTCCAGGATG GCACTTTCAT 000480
000481 GCTGGGAGTG AGCTTGCCCT GTGCCAGGCT GTCATTGAGA CGTTTTCCAT TCAACAACTG TTTCTCAGAC Aaggcacagg 000560
000561 caggttagct ctcccaggcc actcaagtag taaggaaaca gatttaaacc cagacaattt ggctccaCGG ctaaggccca 000640
000641 gagaggggtg gtgacaagcc tagggtcaca cagccacagc cccagagcta ggaACTGCTG GCTAGGGCAA GCAGACAGCT 000720
000721 GAATCCTAGC CAACTGGAGG TGGAGCAGAG GTGGAGCCAG GGAGACCCAG GTGGCCTCTC TCAGAGTGGA GCACAGGTGG 000800
000801 CAGAGTGGCC CGGGGCAGCA TGAAGTGGTG CTGGGGCCCA GTGCTGCTCA TCGCGGGTGC CACAGTCCTC ATGGAGGGTA 000880
000881 AGCCGCCATG TGCTGGGGTA TGGGTGTGGC CTGGTGGGGG CTCAGGGGCC ATCTCTGCCC CAGCAGTCCC TGCTTCTTGG 000960
000961 TGGGGGGACC GCCTGTGGGC GACAGTCCAC CAGTGGGGAT GTAACTCCGT AGGACTCTGT GGGGTGGTAT ATGTGGCCAC 001040
001041 CTGTGTCAAC ATGGATGAGA TTTTCTCGGG CCAGCTGCAG TTTGCGTTGG CGGGGCCTGT GGTCTTGTGT GTGTGTGAGG 001120
001121 TGCTGCCTGC GTGTGTCCTG TGCCTGCCTC CCCCTCGACT TCCACAATGA CGTCAGGCAA ACTCTGGGCT CCTCTGGCCT 001200
001201 CAGTTTCCCT TTCTTTTCAT CCATCCTCTG GGCAGCCTGG CTCAGCTGTC TCATGGGGTG CCTGTGTGCC TGTGAGGGGC 001280
001281 GGTGGGCAGG GGCCCTCTCT CTGGCGGGCT CTCAGACAGT TTCTGGGAAG GTGGGGAAGA CTGAGTCTCT AGACCAGGGT 001360
001361 GAGGTAAGTC TCCATTTCTT GGGGCCCTCC CCACTTGGAA ATGATGCAGG CCTCTAATCC TTCCTCTTAG GCCTCTGCTG 001440
001441 CTAAGAGGAC AATTAAGCTA ATGCTCTCTA CACACACAGG CCGCCTGGCT GACTCAGTGG CGGGGGCAGG AGTTGGGGGT 001520
001521 TCTGAAGCCT GGAGGAGGGC TGGCCTACTC CCAAGCTGAA CCCCAAGCCC CAGAGTGCTG AGCACAGCTG AAGGAGAATT 001600
001601 AATTACTGAG TGTGCACACT GAATAGGTTC CAATAAAAGC TGTCTCGGCC TCATATAAAT ATTTTCATTC TGGGAGGGGC 001680
001681 TGGTAAGGTA ATCAGAGTCA CAGGCAAGGA CCCTGGGCCC GCCCCCCAGC CCATCCCCTC TCCTCCCCAA AGCTAGGCAG 001760
001761 GCCTGGAGTC CCTGCATCTT ACCTGTGTCT CTCTCTTCCC AGGTCTTCAA GCCGCTCAGC GTGGTAAGGT CTGGGGACAC 001840
001841 GGGGCCTAGG TCTTACTTGG GTCTGGGTTG GGACTGGGGT GAGGTCAGGA CAGGTATCTG CTGTCAGTGT GACTAACTCC 001920
001921 TTTCCACAGC CTGTGGACAG CGTGGCCCCG GCCCCCCCAA GCCTCAGGAG GGCAACACAG TCCCTGGCGA GTGGCCCTGG 002000
002001 CAGGCCAGTG TGAGGAGGCA AGGAGCCCAC ATCTGCAGCG GCTCCCTGGT GGCAGACACC TGGGTCCTCA CTGCTGCCCA 002080
002081 CTGCTTTGAA AAGTAAGTCA TGGCTGGGGT CAGGCAGGGT CTCCGGCTCT GGGGAGTGGA CAATTTGTCT CAAGCCCCAC 002160
002161 AAGGCTAGTC CCTGCCTCTA GAGTaataat aaagaaccat ttactgagaa tctgccatgt actgggtaca tattgtcaag 002240
002241 ttaattgtaa caaccacctt tcatggtaga agatttacaa atcagaaaac tcaggttgca agggaatgac ctcgcttaaa 002320
002321 gtcacaGACT GAggccgggc acagtagctc acgcttgtaa tcccagccct ttgggaggcc acggagggag gatcgcttga 002400
002401 gcccaagagt tcaagactag cctgtgcaac atagcaagac catgtctcta caaaaactgt aaaattagcc aggcatggtg 002480
002481 gtgcacgcct gtagtcccag ctactcacga ggctgaggtg ggaggatcgc ttgagcctgg gaggtcaagg cttgtagtga 002560
002561 gtcatggtca tgccactgca ctgcagcctg ggcgacagga cgagacccta cctcaaaaag aaaaaGCCGT GGAGTGCTCT 002640
002641 CTGCTATCTT CCACCTACCT GTGGGGTCTC CCATGGTGTC ACTGTCTACC CTTGCACTCA GCAGCCTGGA CCTTGTCCTT 002720
002721 CCCCTTCCAG GGCAGCAGCA ACAGAACTGA ATTCCTGGTC AGTGGTCCTG GGTTCTCTGC AGCGTGAGGG ACTCAGCCCT 002800
002801 GGGGCCGAAG AGGTGGGGGT GGCTGCCCTG CAGTTGCCCA GGGCCTATAA CCACTACAGC CAGGGCTCAG ACCTGGCCCT 002880
002881 GCTGCAGCTC GCCCACCCCA CGACCCACAC ACCCCTCTGC CTGCCCCAGC CCGCCCATCG CTTCCCCTTT GGAGCCTCCT 002960
002961 GCTGGGCCAC TGGCTGGGAT CAGGACACCA GTGATGGTAA GTGCTGGCCC AGACTGAAGC TCGGAGAGGC ACTCTGCTTG 003040
003041 CCCAGCGTCA CAGTCTCAGC TCCCAACTGT CCTGGCTTCC AGTCTCCCTT GCTTCCCAGA TCCCAGACTC TAGCCCCAGC 003120
003121 CCCGTCTCTT TCACCAGCTC CTGGGACCCT ACGCAATCTG CGCCTGCGTC TCATCAGTCG CCCCACATGT AACTGTATCT 003200
003201 ACAACCAGCT GCACCAGCGA CACCTGTCCA ACCCGGCCCG GCCTGGGATG CTATGTGGGG GCCCCCAGCC TGGGGTGCAG 003280
003281 GGCCCCTGTC AGGTCTGATA GGGAGAAGAG AAGGAGCAGA AGGGGAGGGG CCTAACCCTG GGCTGGGGGT TGGACTCACA 003360
003361 GGACTGGGGG AAAGACCTGC AATCAGAGGG TGTCTGCCAT AGCTGGGCTC AGGCATCTGT CCTTGGCTTT GTTGCCTGGC 003440
003441 TCCAGGGAGA TTCCGGGGGC CCTGTGCTGT GCCTCGAGCC TGACGGACAC TGGGTTCAGG CTGGCATCAT CAGCTTTGCA 003520
003521 TCAAGCTGTG CCCAGGAGGA CGCTCCTGTG CTGCTGACCA ACACAGCTGC TCACAGTTCC TGGCTGCAGG CTCGAGTTCA 003600
003601 GGGGGCAGCT TTCCTGGCCC AGAGCCCAGA GACCCCGGAG ATGAGTGATG AGGACAGCTG TGTAGCCTGT GGATCCTTGA 003680
003681 GGACAGCAGG TCCCCAGGCA GGAGCACCCT CCCCATGGCC CTGGGAGGCC AGGCTGATGC ACCAGGGACA GCTGGCCTGT 003760
003761 GGCGGAGCCC TGGTGTCAGA GGAGGCGGTG CTAACTGCTG CCCACTGCTT CATTGGGTGA GTCTTGGATC CCTCTCTGCT 003840
003841 GTGCCCCCTG CCCCTGCCGG CAGCCCTGTC ACCTGGTGCC GTCCACACTG CCTCTGCACA GGCGCCAGGC CCCAGAGGAA 003920
003921 TGGAGCGTAG GGCTGGGGAC CAGACCGGAG GAGTGGGGCC TGAAGCAGCT CATCCTGCAT GGAGCCTACA CCCACCCTGA 004000
004001 GGGGGGCTAC GACATGGCCC TCCTGCTGCT GGCCCAGCCT GTGACACTGG GAGCCAGCCT GCGGCCCCTC TGCCTGCCCT 004080
004081 ATCCTGACCA CCACCTGCCT GATGGGGAGC GTGGCTGGGT TCTGGGACGG GCCCGCCCAG GAGCAGGTAG GTGGGCACAG 004160
004161 GGCCAGGGCT GCTGTCCATC CAACCTGCAG GCCGGGGCAG CCAGCTTTCC CTTGCTCCAC AGGCATCAGC TCCCTCCAGA 004240
004241 CAGTGCCCGT GACCCTCCTG GGGCCTAGGG CCTGCAGCCG GCTGCATGCA GCTCCTGGGG GTGATGGCAG CCCTATTCTG 004320
004321 CCGGGGATGG TGTGTACCAG TGCTGTGGGT GAGCTGCCCA GCTGTGAGGT GAGCCCCAGG CCCCCACACC TTACCTAACA 004400
004401 GGCCCCTGGC ATCCCCTCAC CCAATAGCTC AAGAACGGAC CTTCCAGGCT TGGCCTCTGG ACCCACCTCC CACCTGAAAC 004480
004481 TAAGCCTTTT TGCCAATTAG CCCCCAAACA GCCAGAGGTT CCCTAGCCTG CTCTACCGTC CTGCACAGCT GCCTATAAAA 004560
004561 AGTCACCCAG TGTCACCTGA CCCCTGACAG GGCCTGTCTG GGGCACCACT GGTGCATGAG GTGAGGGGCA CATGGTTCCT 004640
004641 GGCCGGGCTG CACAGCTTCG GAGATGCTTG CCAAGGCCCC GCCAGGCCGG CGGTCTTCAC CGCGCTCCCT GCCTATGAGG 004720
004721 ACTGGGTCAG CAGTTTGGAC TGGCAGGTCT ACTTCGCCGA GGAACCAGAG CCCGAGGCTG AGCCTGGAAG CTGCCTGGCC 004800
004801 AACATAAGTA TGTGGCCCCG GGGCCTCCTG CCAAACCCTG CCTCTCCAGG ACCCTTCTCT CTCCAGTGAG AACGTGCCGT 004880
004881 TCTAACCCAC TCCAGCTGCC TTGGGTAGGG tggagcaaca ggcagaccca tttgattcag attctggttc tttgtcatcg 004960
004961 tgtgacttgg agcaggctgc tcaaccgctt tgagcctcag tattctcatc tgtCATGGCG GCCAAGACAG ACCCTGTTCC 005040
005041 TTCGAGGAAT GGGGAGGGAG GGAGGGACCA AAGCCGTGAG GATGAGGACA ACTCCACCCT CCTTCCTTCC CCACAGGCCA 005120
005121 ACCAACCAGC TGCTGACAGG GGACCTGGCC ATTCTCAGGA CAAGAGAATG CAGGCAGGCA AATGGCATTA CTGCCCCTGT 005200
005201 CCTCCCCACC CTGTCATGTG TGATTCCAGG CACCAGGGCA GGCCCAGAAG CCCAGCAGCT GTGGGAAGGA ACCTGCCTGG 005280
005281 GGCCACAGGT GCCCACTCCC CACCCTGCAG GACAGGGGTG TCTGTGGACA CTCCCACACC CAACTCTGCT ACCAAGCAGG 005360
005361 CGTCTCAGCT TTCCTCCTCC TTTACCCTTT CAGATACAAT CACGCCAGCC ACGTTGTTTT GAAAATTTCT TTTTTTGGGG 005440
005441 GGCAGCAGTT TTCCTTTTTT TAAACTTAAA TAAATTGTTA CAAAATAGA
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Predicted Small Protein

Name NONHSAT141860_smProtein_4013:4267
Length 85
Molecular weight 8877.1099
Aromaticity 0.047619047619
Instability index 49.219047619
Isoelectric point 8.68499755859
Runs 11
Runs residual 0.0030330603579
Runs probability 0.0238794944678
Amino acid sequence MALLLLAQPVTLGASLRPLCLPYPDHHLPDGERGWVLGRARPGAGRWAQGQGCCPSNLQA
GAASFPLLHRHQLPPDSARDPPGA
Secondary structure LHHHHHLLLLEELLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLHHHH
HHLLLLHHHLLLLLLLLLLLLLLL
PRMN -
PiMo -