NONHSAT141904
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141904 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
9649 nt |
Genomic location |
chr16-:31460668..31470316 |
Exon number |
1 |
Exons |
31460668..31470316 |
Genome context |
|
Sequence |
000001 AGAAGAGGGT TAAACCTACC GAGAACGTTC GCTGCCGCTT CCTAGAGTGA CGGGCTTGTG GAATTTTCCG TTTCCGGAGC 000080
000081 TGGACCCCGG TGTCCCGAGT GTCCTCCGCT CTGGACGTGC TCGTGAGCTC AGGAGCTGGC ATCTAGGAAA CGGGGAGTTC 000160 000161 TTCACTCGCA GCGCAGTCGG CCGCGCCAGA AGAGGCGAGG GAGAATCCGG ACGGGGCGGG GCGGCGGGGG AGCGGGACAT 000240 000241 TCGCGTCCCG GGGAGCCCCC AGGTCACCCC TGGATTGCGA GGTGGCTCCG CCTGAGCAGC CCTTCCTGGT GTGGTCGGGG 000320 000321 CAGCTGCCCG CCCGGAAAAT GGTCAGGCTC TAGCCCTGGG GAGGAAGAAG CCTTTGCCAA GAGCAACCGT CTACAAGCCC 000400 000401 CAAAACCTGC GAGTGCCGGA AATGTGGACT GACCACAGCC TGCCTCCCCG GCTTCATTCA CCACCAAGGC AGCCCCTCTG 000480 000481 GTGACAAGCC TTACCGTTGT CCGGGTTATG GCAGAAGCTT CCGATGTGGC TCTGATCTGG TTAAGCACCA CTGGGTACAC 000560 000561 ACCGGTGAAA AGCCGTACTC CTGCCCCGAG TGTGACCATC GCTTCGGCCC TATGCCTGTG CCTAGTGTGG TAAGACTTTC 000640 000641 AGCGTCAGCT CCAACCTGAT CCAGCACCAG CGCGCTCACA CCGCTAAAAG CCTTACCGCT GAGGGGACTG CGGCAAGAGT 000720 000721 CTCAGCCTTG GCTCCACCCT GTTGCAGCAC CTGCGCTCCA CATGGGTGAG AAGGCCTCTA AGTGCCTTGT TTGTAGTAAG 000800 000801 AGTTTTGTGC ACAGTTGGAA TCTGCTGCGG CACCAGCACA GTCACAAAGT CCGGAAACCT GATGCTTGGT GGTGAGTGTG 000880 000881 GCCAGACCTT CGGCCACAGC TCCCACCTGC CCATCCACTA GGCGGCCCAC AGCAGCACCC CTGCGTCTGC CTGCAGTGTG 000960 000961 GCAGGGCCCT AGCGCAAAGC TCCAACCTGG GCCAGCACCA GCGGACGCAC TAGGGCGGCA GCCTCTGCAA ATAGCCCTGG 001040 001041 CTTCAATTTT AGCTGAAACT TCAGCTCTGA CTTTGGTTCG GACTTCAAGG AAATGGAAGG AACCAGGATC TCTAAGCAGA 001120 001121 CCCCCTTCTG CTCCCTTAGG GCTGTTGATT TTAGAGCTAA TGATGGGATT CGGTTGGGGC GAGGGGGTCT CCACATCTTT 001200 001201 TTGCCCAACC CTTTGCTAAG TCAAGGAACC CCAGTCTGgg ctgggcatgg tggctcatgc ctgtaatccc agcactttgg 001280 001281 gaggccaagg ttagcggatc actggaggcc aggagttcga gaccagcctg gccaacatat tgaaaccctg tctctactaa 001360 001361 aaaaaaaatg ctaggcgtgt tggctctcgc ctgtaatccc agctactcgg gaggctgagg caggagactc acttgaaccc 001440 001441 cgggaggcgg aggctgcagt gagcgaagat cgtgccactg cactccagcc tgggcgacag agagtgtctc aaaaaaataa 001520 001521 caaatttaaa aaTTGTTTTT AACAAAGGAG CCCCagtctg gaagaatcag aacactagat ctgtgatcac tgccttcaaa 001600 001601 gagcccagtc agctgagagg gcttaggttt gttctttgaa gttacaaaga cagaacgtcg accagctgaa gggagagttT 001680 001681 TGGAATGGCG GGAGCTATCC AGCGTGGACC CAGCTGCCTG CAGATCTGGC AGTAGCTGAC ACAGTCCCTT CACAGGCCTA 001760 001761 GGGAGTGATG GGGTTAATCA CACCTAGAAC AACAGCTACC TCTTCCCAGA GGAATGGGAC CAGAAATCAG GCAAGCCCCT 001840 001841 GTGAGGAGTT CCATGGCAGC GCGCAGGCGG GGCATTCCTA ACCTCCAGAG GGAACCATGA GGGATCCTGT GTTCTGGCAG 001920 001921 ATGGGCCAGA GAATTTGAAC TTGGGACCAT TGTGTGAGCC CTGGGTGTGT GAGCCCTTCA AAAGTCCTCT CAGCACGTGA 002000 002001 GAACTATCAT TATGGATGAT GCTAGGGTGG TGGGGGCCCC AGAACAGACC TGTATGTTGA GTTCAGGGGT TGCTTTGTTG 002080 002081 CATTTCTGGG CAGGGGCAAG AGGCCCAGGG TTTGTCATCT GCCCCTTCCC CTGCCTTATC CCCTTCCCTT CCAAGTTCCC 002160 002161 CAGGCTCCTT TTCTGCCAGT CTGTCAAGAG AGGGAAGAGT GGCGAAGAGT CCTTTGTGCC TGGACATTGG GGACTGAACA 002240 002241 TGGCCCTTTT GCCTGGGCAT TGCCCAAACA TATATTTCTA CTGGCATAAC TTTGTGTATG TGAGAGCCAG GGGTAGGCTT 002320 002321 CCCAAAGCAC CTGCCTGTGC TCAGAGTAGA CACCAAGCTC TGAGGCCCTT CCCTTCCCTG CTGGGGGAGG GAGTTGTCTG 002400 002401 TTTCAAGGAC CTAATGTCCA CCCCTTGTGG GACAGTCCTA CCATCAGTCC AGGCATCTGG TCTGCTGCCC CCAAATTTTA 002480 002481 CCAtcttttt tttttttttt tttttttttt tttgagacgg agtctcactc tgttgcccag gctggagtgc agtggcacga 002560 002561 tctcagctca ctgcaacctc cgcctcctgg gttaaagtga ttctcctgcc tcagcctccc gagtagctgg gaccacaggc 002640 002641 ttgcgccacg atgccagcca gtgtttgtat ttttagtaga gggtttcacc aaccctctac taaagaccag cctctagttg 002720 002721 gtcaggctgg tctcgaactc ctgacctcaa gtgatccatc cgcctcagcc ccccaaagtg ctaggattac aggcatgagc 002800 002801 caccacgccc ggTAATTTTG CCATCTTTTA TCAGGCTTTC TGTGTCGAGG ACGCTACCCA CATAGAGTAG AACCTAAAGG 002880 002881 GAAGGGATGT GAAGTGACCT CACCCTCAGC TTCTAGCTCA TGGTGTCAAG GCTtgtgtga tcttagacac gtctgcctct 002960 002961 tctgagcctg tttcttcatc tgtaaaacag ggatGGGAGG TTGTGGTAAA GATTCCACAG CAACACTGCA CACGCATGAA 003040 003041 GTACCTGGGC CAGGGATGAC TCGGCAGACC TCAGTTTCCC TCTGCCTCCT GCCTAGAGCT GTTAGCAAGC ATCCATCATG 003120 003121 CGGCTCACAC AAGAGCTCCC CCCGGAGGTT ACAGAAATGA AGGCAGCAGC CCCAGTCCTT GGGTAGCCTG TTTCCCCTTG 003200 003201 AAGGAAACAG ACTCAATATC AGCAACACAG AGTGAATGAC GCCAGGGTGG CGAACGGGCC TTTCCTGGAG CAAATGCGGG 003280 003281 AGGCTTCATG GAGATGACGT GTAATGAACA GCACTCATCT CAGGCTGGGA GCAGCACATG CCCCCGGCAG GGAGTCAGTG 003360 003361 ATGAGGTATG GGGTTCTTGA CATCTTCCTC ACCCAGGACC CTTCAGAGAG TACGAGCCAG GGTTTGAGTG AAGGGCCTGA 003440 003441 GCCCAGCACA TGCATGGTAG GCACTCAAAG AATAATTGTC ATGATCAGGT CCTTTTTACA CTGCTTACTA GTGGCCTTTA 003520 003521 AGCCTCAGTT TCCTCACAGT TGCCTTGAGT GAGTGTCAAG TGTTGTAGAC CTCTGCAAAA TTCATAACTG CTTAAGAATA 003600 003601 TTAGGTATGG GTAGAGTAGG CTTGGAAGGA GGATTGGTTT GCAGAATCCC TTTCAGAGAC CTGTAATCTA ATTTCTCACA 003680 003681 TTAGGGCTAA TACTCCTGGG ACCCCTCTCC TCTCCAATTG CATAAAACAG GTTCTGACCA GAACAGCGAG GCAGGCCAGA 003760 003761 CCTCAGAAGC AGAGGGACGG GCTTAATCTA ACAGGAGTTT ATCCCATGTC CTGCATCCAC TGTACCCTGT GCTGGGTTTA 003840 003841 GAAGTAGCTT CACTGTCCAA GCTTGTGACC CAGTGCCCAA GCCCGAGATG GGAAACACAT TTGTTTTGGC tgtgtgtgtg 003920 003921 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtTTTCAAA CAAGCCAAGA tttttacttt ttgagttcca ttttgttgcc 004000 004001 caggctggtc tctgaaactt ccaggctcaa gcaatccccc tgcctcagcc tcccaaaatg ctggaattac aggtgtgagc 004080 004081 taccatgccc atttatttat ttatttattt atttatttat ttttgagaca gaatctcact ctgtcatcca ggctggagtg 004160 004161 cagtggtgca attgtggctc actgtagcct caacctcctg ggctcaagtg atcctcccac cttaacctcc caaggagctg 004240 004241 ggactacagg catacaccac cacacctggc taattttttg atttttaaaa aatgttttgt agagacgggg tctcactgtg 004320 004321 ttgcccaggc tggtcttgaa ctcctgagtt caagtgttcc tctggtctca gcctcccaaa atgctgggat tacagatgtg 004400 004401 agccaccTAA CCTGGTCTTT TTATTTTTTT AAAGAgccaa catttaaata aggagatttc acatcacagt cgatttctgg 004480 004481 ggcttggttt gttgttgttt tttttgtttt tttttttttt taattgagac aggatcttgc caggttgcag actggtcttg 004560 004561 aactcctagg ctcaaatgat cccctcctgg ccgggcacgg tggctcacgc ctgtaatccc agcactttgg gaggcctagg 004640 004641 tgggcggatc acgaggtcag gagatcgaga ccttcctggc taacaaggtg aaatcctgtc tctactaaaa atacaaaaaa 004720 004721 ttagctggaa atggtggcag gcgcctatag ttccagctac tcaagaggct gaggcaagag aatggcatga acccaggagg 004800 004801 cagagcttgc agtgggcgga gatcctgtca ctgcaatcca gcctgggtga cagagcaaga ctccgtttca aaaaaaaaaa 004880 004881 gaaaagatcc cctgccccgg cccttccctc ccccacccac ctcggcttcc gaaagtggta ggattacagg cgtcagtcac 004960 004961 cacacccggc ctgctttatt atttatatca gaagatgctg caacattgga tttttatggc agcagttcgt tgagtagtgg 005040 005041 ctgtcctgga cataggaaca gggacactcc ctcttgcatc cctgactcag cacgtttcat atgtgttact tgcctgtccc 005120 005121 ctgcagaaaa gtacttgagg ttacagtctc CATCCCACCC CACTGTGGGT GAGAAGGACC TTTCCATGCA GTGAAGGCAC 005200 005201 TTTTCCCCTT TCCTTCACCC CTTCCTGTTC CCTTCTCTGC CGTTTTCCTT CTTCTCCCCC AGAACTCCTC TGTGAAATAC 005280 005281 CTGGCCTCCT TCCCTGAGCC TCCCTGTCTC CCTGCCACCC CATCTCCACT CCGTGCTATG ACATCACCCC GTAATTTGAA 005360 005361 GCTCCTTTCC CTATCTGAAG GGAGGCAGAG ACAGAGTGCA CAGGCTCAAC TAGGCAAGGC AGACCCTTGC ATGCCTGGGT 005440 005441 CAGAGGTCAG GGTCTCTGGC ACACATTCCT CCCAGAGCAA CTGTAGGAAG CAAGCCAGTA CAGAGGTACT CTAAGCGCTA 005520 005521 GACAGGACGG GGTGGGAGTC GGTAACATCG TCTCCTCTGG GCTGGCCCTG CTTCTGCTTA GCTCTGGGCA TAAGACTGAC 005600 005601 TCCAGTACAG TCACAGTTAT GTCTCTGAGC TCACCCAGTC CTGGGTTCCA GGTTCCCAGC TCTGAGCCTG GCGAGACACA 005680 005681 CACAGGCTGG TGCTGTGGGA TGTCTTggta cggtggctca cgcctgtatt cccagcgctt tgggaggccg aggtgggcag 005760 005761 atcacctgag gtcaggagtt cgagaccagg ctgcccaacg tggtgaaacc ctgtctctac caaaaatata aaaattagcc 005840 005841 aggcatggtg gcacgtgcct gtaatcccag ctacttggga ggttgaggca ggaaaattgc ttgaacccag gaggtggagg 005920 005921 tttcagtgag ccaagatcgt gccactgcac cccagtttgg atgaaagagt gagactccgt ttcaaaaaaa aaacaaaaaa 006000 006001 aacaaaacca aaaaaTAAAA AAACACATCA GCTTGACATT TTGGAGGCAT TCCCAGACTC AGGGTTAGTC AGCAGATTAG 006080 006081 CATTTAAAAG AAAGTCTTGT CCCTACAGAT TCCCTGACCT CAGCTACCCA TGAAGGGTGG GAAGAGGAGT CCTTAGCAAG 006160 006161 AAGTCCAGGA AGTTGACAAC CTCCTCAGAC CTGATAGGAC ACTCCTCTCT CCACCCTGCC TCCTGACTGA TTTAATCTCA 006240 006241 GGGGTGTGAG GACCTCTGAG ATAGGCCCCA GGAGTCTCAC CCGCACCACT TATGTCTCAG GGCTAACCAG AGACTCCCTG 006320 006321 AAACAGATCC TAGAGGATTC CCAAGTGATA GGATAAATAG AGAGGTACTG AGACTTCCTG GCGTGGGTGA CCTCTCCCAG 006400 006401 Gctggccaac ctcccccatt cagaaatttg ctgagcacca ggagtgaatg aagtaaagga agcccctagg agttcaagaa 006480 006481 gcagagattt ccaggtccat gcaccaaagc tcatgtgctc aattctcagg aaaggcctca ctcagTTAAA AAATTTTGTA 006560 006561 TCATGAAAGG GTAAATGAAT TAATTAGTGA ATCTGGTTTC TAAGCCAATG GCTTACTAGA AATATTATAG TAAATCAGAA 006640 006641 AAAAAAAAAA AGgcggtggc tcacacctat aatcccagca ctttgagagg ctgaggtgag aggatgcttt gagcccagga 006720 006721 gttcgagact agcctgggca acatagcaaa ccccatctct agaaaaaatt aaaaaaccag ccaggtgtgg tgatgttcac 006800 006801 tgtagtccca gctattcagg aggctgaggc aggaggaccg cttgagccca ggaatttgag actgcagtga gctaggattg 006880 006881 tgccactgca ccccagcctg ggcaacagag tgagaccctg tctctaaaaa aataaTTTTT TTTAAAGATA ATTCTTCAAA 006960 006961 GGAGATCCGC TCTTCCTTTC CTACACCCAT TCCCTTTCCT CCCTTTCCTG AACAATGCTG TCTTACAGCC TCTAGGGGCA 007040 007041 GGCAGAGCCA AAGAGGCCTC TGCCGGGTGT GGGGAGTGAG ACGCAGCAGG CCAGAGCATG TATCAGAGCT CCAGCAGGTG 007120 007121 GGGGAGGGTG TCCACACGAG AAGGTGGCCT GGCTTGGCAT GGCAGAACCT GATAGGATTA GGAAGGCATC AGCCACGGGA 007200 007201 AGGAGATGGC GAGAGAGATA AGAAACTGCT TCCACCAGCT attggtcaaa taagtacaca tttgaaagat aacagccagg 007280 007281 tttctcagtg tcagagaaaa ccgagacaca gctcgggaaa gggagaaaat gtgggtgggg agacccttgt ggtgtcgaat 007360 007361 tggaactgga ggtataggag tagactcagg attttcagaa agtgtttaga tagacataga aattagtatg ggtgtgtata 007440 007441 tgtgtatgtg cacgcagatg tgtgtaaatg tccatatatt ccctagctct ggaaagccct ggagcagtgc catcccaata 007520 007521 acaaaaagct ttttatggtt ttttgagata gggtctctcc ctcacccagg ctggggtgca gtggtgcgac cacagcccac 007600 007601 tgcagcctcg acttcctggg ctcaggtgat cctcctgtgt cagcctccca agtagctggg actacaggca tatgccacca 007680 007681 cacccagcta atttttaatt tttttttttt gtagggacgg gtcttgctac gttgcccagg atggtcctga actcctgggc 007760 007761 tcaagcaatc ctcccacctc agtctcccaa agtgctggga ctacaggtgt aaCAGTTtta aggtaatcag aatcaagaaa 007840 007841 tgattgaggt gatgctctgg aataatgggg actagagagt cgtgacaact aaatgcaatg tgtggtGTGG TAGCATTTTT 007920 007921 CTGGGCTGTA GTCCCTAGAT GGGTAGAGAA GAAAGCCCCG GAGAGGGTGA AGAGGTGGGG ATGTGGAAGA CGTCAGAGAG 008000 008001 AGCACAGGGC AGAGCGCAGA GAACTGCATC CACAGGCCTC GCCATGCCCC CAGCATGGCT GCACCACACC AGCAGATGCC 008080 008081 TTCGCTTCCC AGCAGTGGAC ACAGGTCACT GGATCCTCAC AAATGAGCAG CCAGGAGAAT GTTTGCAGCC TGGAGATTCG 008160 008161 GGGCTTTGTC AGCACCTTGG GAAGGTTTTG TTCTTGGGTT TTGGGTTTTT GGTTTTTGGA TTTTTTTGGT AACAATATCG 008240 008241 CTATATTTAT TCTCCTGCAG TACACTTTTA AATTGCTTCA ACATTTTCCC CTTAAAATAA AAAAGAACAA CAACAAAAAA 008320 008321 ATTCCAAACC TTAGAATTGA AATATTTGGC CTTTTCTCtc tctctttttt tttttttttt ttttttttga gatggaatct 008400 008401 cgctctgtcg cctaggctgg agagcagtgg cgcgatctca gctcactgca acttctacct cctgggatca agcgattctc 008480 008481 ctgccttacc ctcctgagta gctgggacca caggcgcatg ccaccatacc aggctagttt ttttttgttt tgttttgttt 008560 008561 tgttttgttt tgttggtatt tttagtagag acggggtttc accgtgttag ccaggatggt ctcgatctcc tgacctcgtg 008640 008641 atccgcctgc ctcggcctcc caaagtgctg ggattacagg tgtgagccag tgcacctggc cTTGGCCCTT TCTCTTTTTA 008720 008721 TTTCCTCGCA GTTCTCTCCC ttttttaaaa aaaataataa taaattgaat ttataaatag aggcaaggtc ttgttatgtt 008800 008801 gcccaggctg gtctcgaact cctaggctcg agggatcctc ccaccttggc ctctcaaagt gctggattac atgtgtgagc 008880 008881 caccccacct ggccCCAGCT CTCTTAATTG CCAGCACTCC TCTTGGAAGT Ccctcatctt gattacctta tttaaggtca 008960 008961 cctcctcaca ggccctatct tttttttttt tttttttttt tgagagggag tttcgttgct tttgcccagg ctgcagtgca 009040 009041 atggcgtggt ctcggctcac tgcaacatcc atctcctggg ttcaagccat tcgcctgcct cagcctccca agtagctgag 009120 009121 attacagaca tctgccacca cacctggcta attttttgga atttttagta gagacggtgt ttcaccttgt tggccaggct 009200 009201 ggtcttgaac tcctgacctc aggtgatctg cttgccttga cctcccaaag ttcagggatt acaggcgtga ggcaccatgc 009280 009281 ccagccagtc cctgtcttca aatacagtca cactgggggt taaacaatgt ataaatttgg gggcgataca aacattcagt 009360 009361 ccataacacc ccctataccc caaccctagg caaccactaa tctacatctt atctctacag atgacctatt ctggacatgt 009440 009441 catataaatg gaatcataca atgtgtggtc attcgtgtct ggcttctttc atatagcata atgttatcaa ggttcatcca 009520 009521 cactgtagta tctcatttct ttttattagg aataatacag tttcacttta tggattgctg tggtttgaac ctgtccccta 009600 009601 aagttcatgt gttggaaact taacctccaa ttcaactgtt gagaggtgg |
Predicted Small Protein
Name | NONHSAT141904_smProtein_3887:4186 |
Length | 100 |
Molecular weight | 11257.3047 |
Aromaticity | 0.141414141414 |
Instability index | 44.39 |
Isoelectric point | 6.48907470703 |
Runs | 13 |
Runs residual | 0.00237670825906 |
Runs probability | 0.0267620561739 |
Amino acid sequence | MGNTFVLAVCVCVCVCVCVCVCFQTSQDFYFLSSILLPRLVSETSRLKQSPCLSLPKCWN YRCELPCPFIYLFIYLFIFETESHSVIQAGVQWCNCGSL |
Secondary structure | LLLEEEEEEEEEEEEEEEEEEEEELLLLLEEHHHEELLLLLLLLLLLLLLLLLLLLLLLL LEEELLLLEEEEEEEEEEEEELLLEEEEEEEEEEELLLL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiTTTTTTTTTTTTTTTTTToooooooooooooooo |