NONHSAT141931
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141931 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
933 nt |
Genomic location |
chr16+:31558126..31559058 |
Exon number |
1 |
Exons |
31558126..31559058 |
Genome context |
|
Sequence |
000001 ATGGCCTCCA GGGATTTTTC AATAGGCATG ATCTTCTTAT CTCAGATCAT AGTTGGATTC CTGGGGAATT TCTTTCTTCT 000080
000081 TTACCACTAT AGTTTCCTTT GTTTCACCAG AGGTATGTTA TGGTCCACAG ATCTGATTCT CAAGCACCTG ACCATAGCCA 000160 000161 ACTCCTAGGT TATACTCTAA AGGAATCCCA CAAACAATGG CTGCTTTTGG GTCGAAAGAT TCCCTCAGTG ATATTGGATG 000240 000241 CAAACTTGTG TTTTATGTTC ACAGAGTGGG CAGGGCTGTG TGCGTTGGCA ATGCCTGCCT CCTGAGTGTC TTCCAGGTCA 000320 000321 TCACCATCAG CCCCAGCGAA TTCAGGTGGG CACAGCTTAA ACTACATGCT CCCAGATACA TCAGGTCCTT CAACATCCTG 000400 000401 GTCCTGTGCT GGATTCTGAA CACGCTGGTA AATATTACTG TTCCTCTACA TGTGACTGGC AAGTGGAACA GCATAAATAG 000480 000481 CACAAAGACA AATGATTATA AGTATTGTTC TGGAAGAGGT AGGAGCAGAA TTCTACAGTC ATTACATATT GTCTTGTTAT 000560 000561 CATCCCTTGA TGTTTTGTGT TTGGGGCTCA TGGCCTTGGC CAGTGGCTCC ATGGTTTTTA TCCTGCACAG GCTCAAGCAG 000640 000641 CAGGTCCAGC ACATTCATGG GACCAACCTC TCCCCCAGAT CCTCCCCTGA GTCCAGAGTC ACCCAAAGCA TCCTGGTCCT 000720 000721 GGTGAGCACC TTGTGTTATT TTACTCGCTC TCCTCCATCT TTACACGTCT TTTTCCTAAT CCCAGTTGGT GGCTGTTGAA 000800 000801 CACCTTGGCA CTGATCACTG CCTGTTTTCC CACGGTCAGC CCCTTTGTGC TCATGAGCAG CCATCCCAGA ATAGCCAGGC 000880 000881 TGGGCTCTGC TTGCTGTGGA AGGAATCCAC AGTTGCCTAA GCTGATCAGA TAG |
Predicted Small Protein
Name | NONHSAT141931_smProtein_491:724 |
Length | 78 |
Molecular weight | 8640.8059 |
Aromaticity | 0.168831168831 |
Instability index | 81.2092207792 |
Isoelectric point | 4.92132568359 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0721015132781 |
Amino acid sequence | MIISIVLEEVGAEFYSHYILSCYHPLMFCVWGSWPWPVAPWFLSCTGSSSRSSTFMGPTS PPDPPLSPESPKASWSW |
Secondary structure | LEEEEEEHHHHHHHHHHEEEELLLLLEEEEELLLLLLLLLEEEEELLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiii |