NONHSAT142152

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT142152

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

562 nt

Genomic location

chr16+:34368885..34369446

Exon number

1

Exons

34368885..34369446

Genome context

Sequence
000001 TGAAGAATAC CTCTTTTTTC CAAGCTGGTG TTGGAATCTC AACCGTCAAC TTCCTCATTT TCTTCACACT TCTTCTATAA 000080
000081 TGCAGGCCTA AGCCCACTGA CCTGACCATT AATCACCTGG CCTTCATCCA CATAGTGATG CAATGGTGTC ATTGTTTTCT 000160
000161 CCAGGTGTGT TTGAGTCACT GTATTTTCAG AATGACTTCA AGTGTAAAGT ATTTTCCTAC CTAAACAATA TAATAAGATG 000240
000241 TTTCTCCAGT TGCACAACCT GCCTCCTGAG TGTTCTTCAG GCCATAATTA TCAGCCCCAG CAGCTTTTGG TTGGTGAGGT 000320
000321 TTAACCATAA ATCCACCGTT TTCACCTGCC ATTTCTTCTT CTTTTCATGT TTTCTCAGGT TTTTTTTTTT AGTAGTAATC 000400
000401 TCATCTTGTA CACTATAGCT TCTTCCAGTG TGACCCTGAG CAATCTTCTG CATATCAGTA AATACTGTTC GCTTTTCTAT 000480
000481 CATCAGAAGA CTGTTTCTTA CTCTGTCATT ACCCAGAGAT GTTTTGCTTA TAAGGATAAT GCTGCTTTCA AGTACATGCA 000560
000561 TG
[back to top]

Predicted Small Protein

Name NONHSAT142152_smProtein_137:223
Length 29
Molecular weight 3397.0681
Aromaticity 0.178571428571
Instability index 46.1214285714
Isoelectric point 8.50738525391
Runs 7
Runs residual 0.0467806841046
Runs probability 0.0110909228556
Amino acid sequence MQWCHCFLQVCLSHCIFRMTSSVKYFPT
Secondary structure LLHHHHHHHHHHLLLEEEELLLEEELLL
PRMN -
PiMo -