NONHSAT142187
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142187 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1120 nt |
Genomic location |
chr16+:34659735..34660854 |
Exon number |
1 |
Exons |
34659735..34660854 |
Genome context |
|
Sequence |
000001 TTTGCGGTCG CGGCGGCTGC TGCTCCTGCT GCCTCACGTT GGAATTGGAG ATGCCTTGTC CTGCTCTCAG GACAGAACCA 000080
000081 TGAAACCAGC AGCAGCGGCG GTGCACGATG CTCCCAATCC GTCGCCAGGC GCCGCCTCAG AGCCTGTGGC TGTTCGCCAT 000160 000161 CCCCGGAGCC GATGGGCCGC GTAGCACGGA GTTGCTCCTG CTGGCGGCGA CCAAGGCGGG ACTGGAGCGG CGGGACATCT 000240 000241 CCGGGGAGTG GGTGAAGGAA GAGCCGCAGC CGCCACGTCC TCTCTTTCTC CGGGAATGTG CAGGATTACC GTGAAATTAT 000320 000321 GACTCGTCAT CCTGCAAATT ACCAATGGGA AAATTGGAGT CTAGAAAATG TTGCCACTAT TTTAGCCCAC CGGTTCCCCA 000400 000401 ATAGCTATAT TTGGGTGATA AAAGTGCTCC TGAATGCATT TGCACAAATT CAGCTGCCAT AATAGTTTTG TGAAAAGTAA 000480 000481 CGTGTTTGGT TCCCCAGAAC ACAATACTGA CTCTGGAGCT TTTAAGCAGT TTTATATGTT ATTAGTTAAG GCTTTTAAGT 000560 000561 CATAATAGTT TAATCAAAGA AAAATTTGAA TGATTGGAAA AAGGACTCCA CAGCATCTAA TTGTAGTGCG GTTCTTTTCA 000640 000641 TACTACAAAT CGTTTCCAGG GAGAAAAAGA GAGGACCTGT AAAAAATCTG ATGAGTCAGC CATGAGTTTT TATCCACCAT 000720 000721 CACTAAATGA TGCATCTTTT ACTTTACGGG ATTCAGTAAA GGTTGTGTCG TTTTGAATCA ATTTCTTTTT TAATTGAAAG 000800 000801 AAGCCAAGAA AGACAAGAAC ATGGATGCTT TCATTAAAAG CGTAAGAACA ATGTATTGGC TAAATGGTGG TCATTCCGGA 000880 000881 GGAAGCAATA CTTGGGTTAC TTCACCATAA GTCTTGAAAG AATTTGCACA AACGGGGATT ATTGTTCAAA CCCATGTAAC 000960 000961 ACTGTACTAA GTACATGATC CAATGGGATC TTGATTTGGA AAAGAGCAAA ATAAATTTGT TTCGATACTT AGGGATATTG 001040 001041 TTTTGCAGGT GACTAGCTGA GTTCATTTCA CAAAGGAAGC TCCCTCCATA GAGAATCACT TCAGAGATCA TGAAGTATTT 001120 |
Predicted Small Protein
Name | NONHSAT142187_smProtein_107:313 |
Length | 69 |
Molecular weight | 7558.7434 |
Aromaticity | 0.0588235294118 |
Instability index | 82.8676470588 |
Isoelectric point | 7.95684814453 |
Runs | 7 |
Runs residual | 0.037559618442 |
Runs probability | 0.0451712216419 |
Amino acid sequence | MLPIRRQAPPQSLWLFAIPGADGPRSTELLLLAATKAGLERRDISGEWVKEEPQPPRPLF LRECAGLP |
Secondary structure | LLLLLLLLLLLLEEEEELLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL HHHHLLLL |
PRMN | - |
PiMo | - |