NONHSAT142393
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142393 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
934 nt |
Genomic location |
chr16+:50080407..50081709 |
Exon number |
2 |
Exons |
50080407..50080806,50081176..50081709 |
Genome context |
|
Sequence |
000001 TGTCAGTCTT CTCTGAGGCG GCGCTGGAGA AGGAGCTGTC GGGGTTAAGC AATGCGCAGC AGAGCATGCA GACCTGGTCC 000080
000081 CTGTGGCTCA TTCATCACAG CAAGAAGCAC CCGGGCCCGT GGTCACCGCA TGGTAGCTGG AGCTGCAGAG AGCAAAGCCA 000160 000161 AACAGGAAGC TTACTTTTCT TACCTTGCCA GTgagaccac ctgggcaaca tggtgaaacc ttgtctctac taaaatacaa 000240 000241 aGCAAAAGGA AGGGGCCGGA GCTTACAAAA GATTTGCACT GGTTATAGTG GAAGCTTTTA AGCATGTTTC AAGTGAAACT 000320 000321 GATGAGAGTT GTAAGAAGCA CAGAAGCACA TTGGAAGAGT GTTGTCTATT TGGGAAGAAA GGTCTGTTTA TGCAAATGAT 000400 000401 AAGCCTAGGA AGCAAATTTA TAAACAGATA AAGATGAATG AAAATAAAAA CTGTTCTTCT CTGGGATCTG CAAATGAGCC 000480 000481 ACCACCACAG ACTCTAAATC TCGTGACAGC ATTACAAAAT CTAGAAAATG CAGCCTTGGG TGATGCAGGA GTTCACTAGA 000560 000561 GGATCACTTT TTTGCCTGCT GTAGACCAAG AAGTATCTCT ACTAGATAAA ATAGCAGATA AAGAACCTGG AGAAAGGCTT 000640 000641 TCTAAAATGA TGGATGCATG TATGTTGCCA GCAGATTACA ATGGCAGAAT GGCAGCAGAA ATAGATGAGG GGAAGCAACT 000720 000721 CACTCGAATG TTAGCAGATT TTCTTCATTG TCCAATGGAA GCCCTCGCAG AGAAAGCATA AATTGGAAGA ATACAAGTGC 000800 000801 AAGTGAGCCA GAGTTTCCCT GGTGTGCAAA GAATTCAGGT CCCCGATCCA GAGCCTGTCA GATTAATCTT GACTACCCAA 000880 000881 TGTCACTGGC AGCCGCATGC ACCTGCCCTT TGCAGGGACA TCTACAGTGA AGAT |
Predicted Small Protein
Name | NONHSAT142393_smProtein_65:193 |
Length | 43 |
Molecular weight | 4900.538 |
Aromaticity | 0.119047619048 |
Instability index | 48.8928571429 |
Isoelectric point | 8.88922119141 |
Runs | 8 |
Runs residual | 0.0143158529234 |
Runs probability | 0.0349982335278 |
Amino acid sequence | MQTWSLWLIHHSKKHPGPWSPHGSWSCREQSQTGSLLFLPCQ |
Secondary structure | LLEEEEHHHHHLLLLLLLLLLLLLLLLEEELLLLLEEEELLL |
PRMN | - |
PiMo | - |