NONHSAT142445
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142445 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1207 nt |
Genomic location |
chr16+:50840166..50841843 |
Exon number |
2 |
Exons |
50840166..50840718,50841190..50841843 |
Genome context |
|
Sequence |
000001 TCAGCAGTTC TCTTTCTGCC TCTCATCTCC CTCCACGATC CTATTTTAAG CCACACTCTT TATCCTTTAG ATGGTTTTAT 000080
000081 GAGATTGAGA TTTTTCTCAG GCATCTTGTC CCTGAGTGCA GCAGCGCCAT CTTGTGGTCA TTACTGGTTA TGGCGCTGTC 000160 000161 CTAGATCTAA GCTCCCAAAC TCCGAGCCGC AGCCAGAACC CAGGCTTGGG AGGCAGCAGG GATTTTGAAA GCCAATGTGG 000240 000241 CAGTCGGGCC AACACACCAG ATTACACACT ACACCCTAAG AGGGTTTAAG TTTCCTCTGC GTCATTTCGG GACAGCTGCT 000320 000321 TAGTGTTGAC CATTTCTGTT TGTGGCTGTC CTCTCTCATA ATGGGCTCTG TCTTGCCCTT TCTCTGCATC TGCTGCTCCC 000400 000401 TCTGTCTTGA GCTTTCAGGC ACCGTCTACA AACGGGGTTT AAAATGAGCT AGCGCCATCT ACTGGGCGAA TGCCGTAAGG 000480 000481 TCGGTTGTGA GGTCCCGGAA TCTGCAAAGG AATGAATGAA TTACAAATCT GTGGCTTTAT GGGGGGAATG TCGccctggg 000560 000561 cgacagagca agactctgtc tctaaaaaag agaatttggt cttggaggcc ctgtgcaaaa tctacagcat caagctctca 000640 000641 gggtagggcc ctggaatgtg cattttgaac acttccccct tttcccacca agagaatcgg gcacacgctg aagtgtgaga 000720 000721 accactgCCA TTATGGAGAA GAGGCTTCCC GCCCCCTCAC CTGCCACTCT AGAAATCCAG AGAAGAGATT CCACTTGGAT 000800 000801 TAAGACTTGC ATAAGTGGgg agttgagtcc agtctctttc ccccactgca ataccctgtt gcggtgACAT GTAATAATAA 000880 000881 TAAAAAGACT TGCATGAACT CCTTTCTGTG CAAATGAGAG CAAGCATCTC TGACAAAACC ACAGTGCCCC TGTCGCTCAT 000960 000961 TTTGTGTGTG GTTTCAGTGA TAACAGACCC AAAGTCCTGG GACCAGCATC TGGCACACCA TGGGGGCTCA AATGGGTCAC 001040 001041 TACTGCTGCT GTTACCTGTG TGAGGCCGGC TGGAGGCCTC CTCAGCATTC CTCACCCCCT CCCATCCACC TCTGCTTGGG 001120 001121 AGGTGGGGGA AAATGGTTTA TACTTTCATA TCAAGGCTCG GCCTGCCACC TCGGGCCCTT CTCCCAGAGC AGGGCTCACT 001200 001201 TCAAGCA |
Predicted Small Protein
Name | NONHSAT142445_smProtein_515:667 |
Length | 51 |
Molecular weight | 5662.5147 |
Aromaticity | 0.1 |
Instability index | 63.744 |
Isoelectric point | 10.313659668 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0428075133959 |
Amino acid sequence | MNYKSVALWGECRPGRQSKTLSLKKRIWSWRPCAKSTASSSQGRALECAF |
Secondary structure | LLLLEEEEELLLLLLLLLLLHHHLHHHHHLLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |