NONHSAT142471
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142471 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1261 nt |
Genomic location |
chr16+:51311763..51313023 |
Exon number |
1 |
Exons |
51311763..51313023 |
Genome context |
|
Sequence |
000001 GGGATGAACA GCCAGAAGAC TACTGCTTCC TCTCTCCCAG TCTGGCTGGG AAGTCTCCTT CCCACAGTCC CAAGCCAGCT 000080
000081 GACCTGGGGA CTGGAGTGGC AGCTGTAGCT TAGGAGAACT GAGATGCAGA GGCCCATCCC ATCAAGAAAG CCAGGGCCAG 000160 000161 GCAGGATGAG CCCAGCATGC TGTCCTCCTC ACTGCTGAGC ACTGATCAGT TGGTTCATAT CTAAAGGAGG AAGACCAGGG 000240 000241 CACTTCCCAG ACTCATGGGC CAACACAGAC TCATAGTCCA CAACTATCCA TGGGTTTTAG TGAGAGCTGG AAGAAGTACC 000320 000321 TCAGTGAAGT TCAGGAAACA GTATTTTATA AAGGTAATGA GATTTGTGCA GAATAAAGCA GACATTACAT TGTTTATTCG 000400 000401 CCCCCACACC AAGTTTTCAC CTAGACCCAT AAGAGATGGG AAGGTTCTAA TTCCCAGACA GGATCCATAT CATGGACCCA 000480 000481 GTCAAGCTCA CAGGCTCTGC TTTCATGTGC AAAGACATGT TCCACCTCCG CCCAGCTCAG AAAGTGTTTA AAAATTGTTG 000560 000561 TCTGCAGACA TAGATGGTTT GCTCACCTTC AGCATGGAGA TTTATCTGGG TGGGCCAAAC AAGGGGTTCT TTTACTCAAT 000640 000641 GCTGTCTCAC TATTCTGGCC CATCAAGCCA GTTCTCATAA GGAGAGAGGC TGGGAGCAAC TCACTGACGC AGTTGTGTCC 000720 000721 TGGCTAAATC AGAACTCGAT CTGGCTTGTC TTCTTGCTCT GGGGCTCTTA TGCTCAGAAG AAGGGCAGTG CCATGGATAG 000800 000801 GAAACAGCAC CACATTCTGC AGCTGGCTCA TCCCTCCCTG TTGTCTGCAT ATAGAGGTTC TTTGGATGTA GACACttttc 000880 000881 tttctttctt tttttttttt ttgaaatgga gtctcgctct ttcacccagg ctgaagtgca ttggcacgat ctcggctcac 000960 000961 tgcaacctcc acctcccagg ttcaagtgat tctactgcct cagcctcccg agtagctggg attacaggtg cgcaccacca 001040 001041 tgcccagtta attttttgta tttttagtaa agaccgggtt tcaccatgat gaccaagctg gttttgaact cctgacctca 001120 001121 agtgatctgc ccacgttcac ctcccaaagt gctaggatta caggtgtgag ccaccagacc cgacTGCATG TAGACACTTT 001200 001201 TCTAAAACCA ATGAGCTGTC TCAGAAGTCC GACAAGAAGT CCATCGACTG GAAGGAGCTG T |
Predicted Small Protein
Name | NONHSAT142471_smProtein_254:550 |
Length | 99 |
Molecular weight | 11519.3332 |
Aromaticity | 0.102040816327 |
Instability index | 45.3908163265 |
Isoelectric point | 11.4286499023 |
Runs | 17 |
Runs residual | 0.0344268548541 |
Runs probability | 0.0360360360361 |
Amino acid sequence | MGQHRLIVHNYPWVLVRAGRSTSVKFRKQYFIKVMRFVQNKADITLFIRPHTKFSPRPIR DGKVLIPRQDPYHGPSQAHRLCFHVQRHVPPPPSSESV |
Secondary structure | LLLEEEEEELLLEEEEELLLLEEEEHHHHEEEEEELEEELLLLEEEEEELLLLLLLLLLL LLEEEELLLLLLLLLLLLEEEEEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |