NONHSAT142768

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT142768

Source

NONCODE4.0

Same with

,

Classification

sense

Length

548 nt

Genomic location

chr16+:57653652..57685343

Exon number

4

Exons

57653652..57653793,57675503..57675620,57684165..57684263,57685155..57685343

Genome context

Sequence
000001 AAAGAGTTGG CAGATCACGG ATGGAGGGCA GCATCTCCCA ACAGCCTGGG CGGCCGCTGA GACCCAGAGA ACCCAAGGAC 000080
000081 TCCCCTGGGC TCATCCAGCA GCCTCTGCTT CCCAGGAGAG AGGTGCTGAA GTCCACGAAG AGggtctcgc tctgtcacac 000160
000161 aggctggagt gcagtggtgt gatcttggct catcgtaacc tccacctccc gggttcaagt gattctcatg cctcagcctc 000240
000241 ccgagtagct gggattacag GTGGTGACTT CCAAGAGTGA CTCCGTCGGA GGAAAATGAC TCCCCAGTCG CTGCTGCAGA 000320
000321 CGACACTGTT CCTGCTGAGT CTGCTCTTCC TGGTCCAAGC CAGCGGAACC AGACACACAG GAGCAGCCTC CACTACAAAC 000400
000401 CCACACCAGA CCTGCGCATC TCCATCGAGA ACTCCGAAGA GGCCCTCACA GTCCATGCCC CTTTCCCTGC AGCCCACCCT 000480
000481 GCTTCCCGAT CCTTCCCTGA CCCCAGGGGC CTCTACCACT TCTGCCTCTA CTGGAACCGA CATGCTGG
[back to top]

Predicted Small Protein

Name NONHSAT142768_smProtein_20:181
Length 54
Molecular weight 5917.8266
Aromaticity 0.0188679245283
Instability index 76.041509434
Isoelectric point 10.8430786133
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0189895778132
Amino acid sequence MEGSISQQPGRPLRPREPKDSPGLIQQPLLPRREVLKSTKRVSLCHTGWSAVV
Secondary structure LLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLEEEEEELLLEEEL
PRMN -
PiMo -