NONHSAT142791

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT142791

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2393 nt

Genomic location

chr16-:57808621..57811013

Exon number

1

Exons

57808621..57811013

Genome context

Sequence
000001 ttgtaaatgg aattattttc ttaatttcct ttttggattg tttattgtta gttgtagaaa tgtaaccgat ttttgtgtgt 000080
000081 tcattttgta tccttcaact ttgctgaatt tattagttct aaTTGCCCtg cttttaaaat caaattaatt ccaacattca 000160
000161 aatcttaatt aaattcacat aaaactctag acttcctttt tgtcataaaa tattggaaga tgtggcacct ctgagctgac 000240
000241 attcccacat ggcacccacc gcttgaggtc tagtggcagc tcctgccttt ggtggaggtg accatccttt agcacgctcc 000320
000321 agccccaccA CCCTTTCTGT CTCTGCTTAC CAACCTCATC CACAAGTTCT GCTCTGGCTG GCCCCTCATG CATTCAGCAT 000400
000401 TCTTCCTACA GGTacttact gaacacctac tgtgtaccag gcactgttcc aggcactggg agtacagtgc tgaacacaac 000480
000481 agacaaaaat ccctgccttc gcatatatca tctcgtttaa tcctcgagac agcttccatg aggtagcctc attatacaaa 000560
000561 taaggaaact aagagacata gagaacttaa gagacttgtc caaggttacc cagcaggtaa ggggatgtct ggattagaac 000640
000641 ctgggcagcc tggctttaga attcgaattg tcagctgcta ttactgCCCA TCAGTGGCGG AAGGACCCAG AGGTGAAGAC 000720
000721 TTGGCAACAG AGGCAGGGTG GCGTGGACAG GGGACAGATA GGCCTGGCCG GTGGTCATAC AGCCAGGATC AGGCCTTCTG 000800
000801 TGGGCTCCAC AGGGTGTGCT CCCAGGGCCG CCCCGCTGGC CTCTGGGCTG AGTTTCCTTG AGGTTGTCTG GATCCCAGAC 000880
000881 CCTCTGGCCT TCCCAGCTCA GCAGCTTCAG CCTGGGAGAG CCCGCTTTTC CTCAGCAGAC AGCTGATGAT CGTTGACTGG 000960
000961 GCTTGGTGGG AGGTAAGGAG GTAACCAGCA GGTTTTCTTT CTGTGATGGT AAGAGGCCGC CTTGGAAGCA GACAGCTGAG 001040
001041 AAAACACAAA GACCTGGGCT GGCTGGCCCC ACCCTTGGTC GAGCCGCTTC TGCCTGTGAA GTGTAAATGC AGGTGGTGTC 001120
001121 AAGCCGGCAG ACAGGCCCAG CTCCCTCTTC CCCTTGAGCA GGCAGGGTGA CGCCCCCTGC AGCAGGCCCG TGATTCAGTT 001200
001201 GCTCTGGCTG ATGAGGAGCC TGGGCCCGGG AGGAGTGTCG CACAGCCCCA GCCTGGTCCG TCCTCAGCCC TGGATTGACG 001280
001281 TCCATGCTGT CCTGGGACCG TTTCAGCCGC CTAGTGGGGA GTCTGCTTTC TCCTCCGTCC TGTGTCTTGG GCTCAGGCAT 001360
001361 GTGCCTGCTG CCCCTTTGTG GCCACAAGTA TGTATCGGGC CCAGGGTGGC ACTCGGGACC CTCCCCTGTT GGGCTTAGAG 001440
001441 ACATGGACGG CCCTTGCTGG CTGGAAGCTG CGGTGAGTGT GTGAAGGGCC CTCAGTCTTC CCTGAGGAAG GCCCTGCCTG 001520
001521 CTCTTGGCTC TCACTGCTCC CAGGCCATCT TCCATCCGCT TTCCCCAGGT GCCTCCGTTT CTCTCTGACT TCTTGCCTGT 001600
001601 TTTCCCTAAC TCTGAGAGAT TGCCTGCCTT CAAGTGCAGG AGAAAGCAGA CATCTTCCCT ACAAGCCCGA GACCTAGCCC 001680
001681 CCAGTAGAGC TGGCCAACCA CCTGCCACGG AGCAGGCCAC TGGTGCCTTG GCCAGAGTGC TCGTGGTGCC AGTCTGCTGC 001760
001761 GTCTCAGTCA CATTCCCCCT GCTTTGCTGC CCTCAAGAAG CCAGAGATGA CCTAGTGTCT GACACCTCTG AACAAAGGGG 001840
001841 CCTTTAGAGC CCCTTCCTCA ACTCCCTCAC CATCCCCCAT GCTCCCCAGC CTGCCCTGGT TGCGGTTGCG GCCACTTCCT 001920
001921 TTTGGGTGCC CCTCTGAGAT TCTGGACAGA GCCCAGGAGC CCCCAGGTTC CCATTGTGAT GCAAGGACAG AACAGAACCC 002000
002001 TGGGCCGCAG GCAGGTGGCT GGTGGGTATC CCGCCTCCCA CCCCCAGCAA ACACTGGCAA ACCCCACTCT CCCTGCATCA 002080
002081 GGGTCTGAGT GCCTGGCAGG GGCGGCAGTG GAGATGATCA AGGTTAGTGC GCCCAGCCCC ATGCTGAGGC AGCAGCCTTT 002160
002161 CTGGGGAGGG AGGGGGCGTG GAAGGAGACT TCAACCTTTT GAAGAGGAAG TCAGTTCACT TATGTCAGGG TAGGGAGAGT 002240
002241 AGGAATTACG TATTCTTTGA GACTGAAAAA TTACTggccg ggcgcagggg ctcacaacgg taatcccagc actttgggag 002320
002321 gctgaggcgg gaagactgct tgaggccagg aattcaaggc cagcttgggc aaaatggcaa gacccttcta tac
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Predicted Small Protein

Name NONHSAT142791_smProtein_1283:1483
Length 67
Molecular weight 6971.0947
Aromaticity 0.0757575757576
Instability index 59.9515151515
Isoelectric point 6.68206787109
Runs 13
Runs residual 0.0463618218109
Runs probability 0.0425448072507
Amino acid sequence MLSWDRFSRLVGSLLSPPSCVLGSGMCLLPLCGHKYVSGPGWHSGPSPVGLRDMDGPCWL
EAAVSV
Secondary structure LLLHHHHHHHHLLLLLLLLEEELLLEEEELLLLLLEEELLLLLLLLLLLEEELLLLLLEE
EEEEEL
PRMN -
PiMo -