NONHSAT142831

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT142831

Source

NONCODE4.0

Same with

,

Classification

sense

Length

570 nt

Genomic location

chr16+:58329301..58426478

Exon number

3

Exons

58329301..58329438,58363767..58363853,58426134..58426478

Genome context

Sequence
000001 AGTTTCCGGG TCCAATCTAA GCTACCAGAC CAGCTCTGCC AAACCAGAGG CCCAGATGGG ATCTGCCACT CCAGCCACTG 000080
000081 TGAGCAGCTT TGGTTTCAGC CCAAATGCCA GGACTCGAGA AGTGTCGACA AGGTTGAGgt tccgggatac atgtgcagaa 000160
000161 catgcaggtt tgttacatag gtaaacatgt gccatggtgg tttgctgtac ctatcaaccc attatTTAAG GATCACATGA 000240
000241 ACACAATCCA GTACAAATGG GTCCAGGAGC TTCAACGAGC GTTCCAGCTT CTTCGTAACG TTCCCACACC GTGCAGCAAG 000320
000321 CGGAGGGAAG AGAACTTCCG GCGCCCCCAC CTACCGCTCC CCAGCCGTGT CCCGCTGCTC TAAATCTGCA GACTTGATCG 000400
000401 ATTGCTTCTG CCTGGGCGGT ACCGCCCGAA TTGACTGCTC CTGTCTGATG CGTCCCCGGG CGCGGGAAAC GAGTTTCAAT 000480
000481 CCACTTTCCT GACCCCAACC ATCCTGCCCA GTCTCCGCTT CCCCGTCTTG TACACCCCTA ACTCCTGAGG CTCCTCCGAA 000560
000561 TCACGCGAGT
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Predicted Small Protein

Name NONHSAT142831_smProtein_161:382
Length 74
Molecular weight 8866.3831
Aromaticity 0.123287671233
Instability index 57.1383561644
Isoelectric point 10.2894897461
Runs 9
Runs residual 0.0208572691118
Runs probability 0.0491275589316
Amino acid sequence MQVCYIGKHVPWWFAVPINPLFKDHMNTIQYKWVQELQRAFQLLRNVPTPCSKRREENFR
RPHLPLPSRVPLL
Secondary structure LEEEEELLLLLEEEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLHHHLL
LLLLLLLLLLLLL
PRMN -
PiMo -