NONHSAT142974
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142974 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1055 nt |
Genomic location |
chr16-:65261690..65310258 |
Exon number |
8 |
Exons |
65261690..65261924,65263884..65264121,65264160..65264260,65264636..65264782,65266918..65267013,65268789..65268867,65309694..65309808,65310215..65310258 |
Genome context |
|
Sequence |
000001 CAGGAGCCCA TTTAAGCTCC TGTATAGACG CTCCTTTTTA TTAGTCTTCT AACAACCCCA CAGTATCACC CCTTACCACA 000080
000081 AGACCTCCCT TCAGCTTAAT CTCTCCCACT CTAGGTTCCC ACGCCACCCC TAATCCCGCT TGAAGCAGCC CTGAGAAACG 000160 000161 AAATAAACAG CCATGTTGCT CACACAAAGC CTGTTTGGTG GTCTCTTCAC ACAGACGCGC ATGAAATTTG GTAATCAGTC 000240 000241 GGCTTAGCGG CTGAAGACTG ACACTGCCCG ATCGCCTCGG AAGCCCCCTA GACCATCACG AACGCCGAGC TTTGGGTAAC 000320 000321 TCTCACAGTG AAAGGCCCCA GTCTCATTCG ACACCAGAGC AACTTAGACT GTGCCCCCAA AAAAACTTGT CATCCCTACT 000400 000401 ATCTTTTGTC TAGTCATACT CCTATTCATC GTTCTCAACT ACTCATACAT GCCCTGCTCT TGTTTACACT GCCGGTTTAC 000480 000481 ATCGCCCATT CTCTCTCCAT GTCACCCTCC AAAAATTTTC GCCGCCCCAA CACTTCAACA CCATTTTGTT TTATTTTTCT 000560 000561 TATTAATATA AGAAGGCAGG AACTGTGACT TGCAGGTATA TGCCCAGATG GCCTGAAGTA ACTGAAGAAT CACAAAAGAA 000640 000641 GTGAATATGC CCTGCCCCGC CTTAACTGAT GACATTCCAC CACAAAAGAA GTGTAAATGG CCGGTCCTTG CTTTAAGTGA 000720 000721 TGAGGTTACC TTGTGAAAGT CCTTTACCTG GCTCATCCTG GCTCAAAAAG CACCCCCACT GAGCACCTTG CGACCCCCCA 000800 000801 CTCCTGCCCG CCAGAGAACA GTGATCTTCA ACATTAGAAG CTCTAATGGG TTCTGCCCTG GTGATGGCCC TTCCCCAGTC 000880 000881 TGGACAACAC ACTTCAAGAG TAAAACTTTG CTGTAAATAA ATGAATCAAC AAACAAATGA ATAACAAGTG AACACATGTG 000960 000961 TACAGCAAAT GTTGAAACAG CCCTTTCAAC TTTAAAGGTA CCCCTGAAGG TCATCTTCAG GGAGGAGTAA CAGAATGAGG 001040 001041 GGTTCACAAA TGAAG |
Predicted Small Protein
Name | NONHSAT142974_smProtein_845:919 |
Length | 25 |
Molecular weight | 2546.0653 |
Aromaticity | 0.0 |
Instability index | 49.2291666667 |
Isoelectric point | 9.50018310547 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0462462462463 |
Amino acid sequence | MGSALVMALPQSGQHTSRVKLCCK |
Secondary structure | LLHHHHHHLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |