NONHSAT143120
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143120 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
908 nt |
Genomic location |
chr16-:67438061..67450736 |
Exon number |
4 |
Exons |
67438061..67438615,67440103..67440345,67441670..67441716,67450674..67450736 |
Genome context |
|
Sequence |
000001 AAGCTCCCGG AAGGGTCGGG ATATCATGGA TGTTCCAGCA CATACGCTCA TTGAAGTGTG CAGCTGTTTT CAAGtcagca 000080
000081 aacatttact gaggatctac tatgtacaag ATGAACATCT GCAACAAGCC CTCCAACAAG ACGGCCCCTG AGAAGAGTGT 000160 000161 GTGGACGGCA CCGGCACAGC CCAGCGGACC CTCCCCTGAG CTGCAGGGCC AGCGATCCCG CCGGAATGGG TGGAGCTGGC 000240 000241 CCCCTCACCC GCTCCAGATT GTGGCCTGGC TGCTGTACCT CTTCTTTGCT GTGATCGGCT TTGGGATCCT TGTTCCCCTC 000320 000321 CTGCCTCACC ACTGGGTGCC CGCTGGCTAC GCTctgggca cagaggttct gtgacttcct gagatcacat agcgggcacc 000400 000401 cagtgaggcc agatgggctg cccaggaagc ctgactGTCC TGAGAGGGGC GGGTTGAGGG CTTTGTCTCC GCATTCAGGG 000480 000481 TTCGTCTGCT TTGAGCATTG CAGAGGCTCA CAGAACCACC TGGTTCATGC CTGACCAGCC TATATGCTCT CCTTCCTTCC 000560 000561 ATCAAAGCCT TCTTTCTGCA GGCTCTCTCA GGTCCCCTGA GAAGTGAGGT AAGGTCATAA TGGGTACCAG GTACCCACCT 000640 000641 TGGGCCTGGA ACTGGCCTGG GCCTTAGGGA TACAAGCTGA GCCCTAGGGT GCTGGGCCCC CAGCTGAAGG GAAGGCTGGT 000720 000721 GCACGCCACG TGGTGATCAC GCCACATGGT AAGTGCAGCA GACTGTGAGG GCAAGCAGAG GCCACCTACA CCAGTATCAC 000800 000801 CGCATGTCCA CAGGCACACT CGTGGCCTGT GGCTCCCCCC CTCCCCCGCC CCACCTCTCC CCACATGCTc ttggctcctc 000880 000881 ccgcttcctt cctaacttaa atccagtc |
Predicted Small Protein
Name | NONHSAT143120_smProtein_101:373 |
Length | 91 |
Molecular weight | 10061.6288 |
Aromaticity | 0.122222222222 |
Instability index | 82.8322222222 |
Isoelectric point | 9.65289306641 |
Runs | 9 |
Runs residual | 0.0398589065256 |
Runs probability | 0.024897446466 |
Amino acid sequence | MYKMNICNKPSNKTAPEKSVWTAPAQPSGPSPELQGQRSRRNGWSWPPHPLQIVAWLLYL FFAVIGFGILVPLLPHHWVPAGYALGTEVL |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEELLLLLLLLLHHHLLLLLLLLLLLLLLLHHHHHHHHHHH HHHHHLLLEEELLLLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHH HHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTT TTTTTTTTTTTTTToooooooooooooooo |