NONHSAT143484
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143484 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
528 nt |
Genomic location |
chr16+:71547731..71551750 |
Exon number |
4 |
Exons |
71547731..71547838,71548602..71548724,71549157..71549209,71551507..71551750 |
Genome context |
|
Sequence |
000001 TCCGGAATCC AGGAAGTGTT TGGATATTGG AAAAACAAAA ACAAAAAAAA ACCTTTGTTC TGTAAGACAG TATAGAAAGT 000080
000081 TGGGAGAAAG GTCTACTCCA GGATCAAGga cctcctgaaa gggtctcgag gaccccaatg gttcctggac cacactttga 000160 000161 aaacTATGGA TCTGAAAATA ATTTAGGATT GCATTTTCCT GTAAtgccgc gtcttagcaa tgtgaccttg gCAGGGAGGA 000240 000241 AGAGGCCAAG GTTTCAGAGC CTCAGGAATG AGGAACAGCA GGAGGGAACT GGACCAACAG GACCCAAGGG AGAGTATCAA 000320 000321 AGGCAAAACA AAGGAAAATG AGGACAACCC AATACTCAGA AAAAAAAACG AGTAATTCAT GGATTCACAA CGGGCAACAA 000400 000401 ACTAGATGAC TATTAGGAAG AGAAGAGCAA ACCTTATGAT CTCAAAATGA TTTCTTGTTC ATTTGCATCC TCGCATCAAT 000480 000481 CTAGACTTTA AGAAATATGT GATTTTTAAA TAAATGGGTA TATCTGCA |
Predicted Small Protein
Name | NONHSAT143484_smProtein_137:340 |
Length | 68 |
Molecular weight | 7564.3733 |
Aromaticity | 0.0746268656716 |
Instability index | 50.2119402985 |
Isoelectric point | 9.98382568359 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.037164615596 |
Amino acid sequence | MVPGPHFENYGSENNLGLHFPVMPRLSNVTLAGRKRPRFQSLRNEEQQEGTGPTGPKGEY QRQNKGK |
Secondary structure | LLLLLLLLLLLLLLLLLEEELLLLLLLLEEELLLLLLLLLLLLLHHHHLLLLLLLLLLLL EELLLLL |
PRMN | - |
PiMo | - |