NONHSAT143490
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143490 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
785 nt |
Genomic location |
chr16+:71598878..71610253 |
Exon number |
4 |
Exons |
71598878..71599025,71599954..71600104,71605923..71606388,71610234..71610253 |
Genome context |
|
Sequence |
000001 CCTAAACATG CATCCGCGCC TGCGCAGCCG CGGGTCGCCC AGGGTTGGGA TGTTGGTGTC GGCTGGGGGC TGCTGTGAGG 000080
000081 CGCTTGGTAG CACCCAGTCC TGATACTCTC CAGTTACCCG GTAGGCGGGG CTCGGACACA AAGAAAAGAG ATCTTTGGGG 000160 000161 GCTTGGATGG AGGAACAGGA AAAGAGGAGC CAGGCTTTTT TGGAAAATTG GCGGCAGCGG TGGCATACGG GAAACTGAAA 000240 000241 TCTTTATCTA ATCTCATCCT TTGTATATTC GTCTTGGATT TGCTGAAGAA AATTAAAAGG CCAGGCCTAC CACTCCTATG 000320 000321 GCACAGTATT GATGAGAGAC ATCAGTGGAG CTCCCCACCT CCACCCCAGG CTTGGAACTT AGGGAATGAC TGGTTTTTGT 000400 000401 CATTTCACAC AACAGCTGAA GGATTCTGTC CCCACCTCGT CCTCTGTGAA GTCTGCTGGA CGTACCTGCC AGAATCTTCT 000480 000481 GAAGATGACG TTTGCTGAAC ACTGACCCAC AGGGGTTTGA TGGATTATTG ACAATGAGAC AAGCTGTCTT TTCATCAATT 000560 000561 AGATATTCCA GTTGTTTCAG GTCAATTTCC CAAGATTTCT CTGGCTGGAG AGAAAGAAAG GATGAGACTA AGATGATTCT 000640 000641 GAAACATTTA GGGGGAATCC TCACTTATCT CAAGGGTCCA ATGTAAGCAA TAAAGTCTGT CTCTGGCTTC AACCACCACT 000720 000721 TTGAGACCTT CCTCTGCTGA AGTAATGTTC ATATATTTTT TACAGAGCTT CTCCCACCAA CGTTG |
Predicted Small Protein
Name | NONHSAT143490_smProtein_533:685 |
Length | 51 |
Molecular weight | 5856.7811 |
Aromaticity | 0.12 |
Instability index | 50.704 |
Isoelectric point | 10.0112915039 |
Runs | 10 |
Runs residual | 0.0353216374269 |
Runs probability | 0.03401342519 |
Amino acid sequence | MRQAVFSSIRYSSCFRSISQDFSGWRERKDETKMILKHLGGILTYLKGPM |
Secondary structure | LEEEEEEEEEEELLEEEELLLLLLLLLLHHHHHHHHHHHLLHHHEELLLL |
PRMN | - |
PiMo | - |