NONHSAT143494
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143494 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
703 nt |
Genomic location |
chr16+:71599692..71606341 |
Exon number |
3 |
Exons |
71599692..71599824,71599954..71600104,71605923..71606341 |
Genome context |
|
Sequence |
000001 AGAAGAAACT GGGTGGCTGA AGGACAGGAA TGAGAAAGAA GGACAGTTGC GTTTGTTTGT ATCGTTTGAA ATTGTCCAGT 000080
000081 GTGTATGTGT TCTTTTCAAA TGTTTGAAGA ACCATTGGCT CCCTTATCAA AATAGATCTT TGGGGGCTTG GATGGAGGAA 000160 000161 CAGGAAAAGA GGAGCCAGGC TTTTTTGGAA AATTGGCGGC AGCGGTGGCA TACGGGAAAC TGAAATCTTT ATCTAATCTC 000240 000241 ATCCTTTGTA TATTCGTCTT GGATTTGCTG AAGAAAATTA AAAGGCCAGG CCTACCACTC CTATGGCACA GTATTGATGA 000320 000321 GAGACATCAG TGGAGCTCCC CACCTCCACC CCAGGCTTGG AACTTAGGGA ATGACTGGTT TTTGTCATTT CACACAACAG 000400 000401 CTGAAGGATT CTGTCCCCAC CTCGTCCTCT GTGAAGTCTG CTGGACGTAC CTGCCAGAAT CTTCTGAAGA TGACGTTTGC 000480 000481 TGAACACTGA CCCACAGGGG TTTGATGGAT TATTGACAAT GAGACAAGCT GTCTTTTCAT CAATTAGATA TTCCAGTTGT 000560 000561 TTCAGGTCAA TTTCCCAAGA TTTCTCTGGC TGGAGAGAAA GAAAGGATGA GACTAAGATG ATTCTGAAAC ATTTAGGGGG 000640 000641 AATCCTCACT TATCTCAAGG GTCCAATGTA AGCAATAAAG TCTGTCTCTG GCTTCAACCA CCA |
Predicted Small Protein
Name | NONHSAT143494_smProtein_518:670 |
Length | 51 |
Molecular weight | 5856.7811 |
Aromaticity | 0.12 |
Instability index | 50.704 |
Isoelectric point | 10.0112915039 |
Runs | 10 |
Runs residual | 0.0353216374269 |
Runs probability | 0.03401342519 |
Amino acid sequence | MRQAVFSSIRYSSCFRSISQDFSGWRERKDETKMILKHLGGILTYLKGPM |
Secondary structure | LEEEEEEEEEEELLEEEELLLLLLLLLLHHHHHHHHHHHLLHHHEELLLL |
PRMN | - |
PiMo | - |