NONHSAT143494

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT143494

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

703 nt

Genomic location

chr16+:71599692..71606341

Exon number

3

Exons

71599692..71599824,71599954..71600104,71605923..71606341

Genome context

Sequence
000001 AGAAGAAACT GGGTGGCTGA AGGACAGGAA TGAGAAAGAA GGACAGTTGC GTTTGTTTGT ATCGTTTGAA ATTGTCCAGT 000080
000081 GTGTATGTGT TCTTTTCAAA TGTTTGAAGA ACCATTGGCT CCCTTATCAA AATAGATCTT TGGGGGCTTG GATGGAGGAA 000160
000161 CAGGAAAAGA GGAGCCAGGC TTTTTTGGAA AATTGGCGGC AGCGGTGGCA TACGGGAAAC TGAAATCTTT ATCTAATCTC 000240
000241 ATCCTTTGTA TATTCGTCTT GGATTTGCTG AAGAAAATTA AAAGGCCAGG CCTACCACTC CTATGGCACA GTATTGATGA 000320
000321 GAGACATCAG TGGAGCTCCC CACCTCCACC CCAGGCTTGG AACTTAGGGA ATGACTGGTT TTTGTCATTT CACACAACAG 000400
000401 CTGAAGGATT CTGTCCCCAC CTCGTCCTCT GTGAAGTCTG CTGGACGTAC CTGCCAGAAT CTTCTGAAGA TGACGTTTGC 000480
000481 TGAACACTGA CCCACAGGGG TTTGATGGAT TATTGACAAT GAGACAAGCT GTCTTTTCAT CAATTAGATA TTCCAGTTGT 000560
000561 TTCAGGTCAA TTTCCCAAGA TTTCTCTGGC TGGAGAGAAA GAAAGGATGA GACTAAGATG ATTCTGAAAC ATTTAGGGGG 000640
000641 AATCCTCACT TATCTCAAGG GTCCAATGTA AGCAATAAAG TCTGTCTCTG GCTTCAACCA CCA
[back to top]

Predicted Small Protein

Name NONHSAT143494_smProtein_518:670
Length 51
Molecular weight 5856.7811
Aromaticity 0.12
Instability index 50.704
Isoelectric point 10.0112915039
Runs 10
Runs residual 0.0353216374269
Runs probability 0.03401342519
Amino acid sequence MRQAVFSSIRYSSCFRSISQDFSGWRERKDETKMILKHLGGILTYLKGPM
Secondary structure LEEEEEEEEEEELLEEEELLLLLLLLLLHHHHHHHHHHHLLHHHEELLLL
PRMN -
PiMo -