NONHSAT143646
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143646 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
679 nt |
Genomic location |
chr16+:73798555..73830327 |
Exon number |
5 |
Exons |
73798555..73798607,73800298..73800568,73804730..73804833,73808865..73809091,73830304..73830327 |
Genome context |
|
Sequence |
000001 GGATGCTTGG CCAAAATGAA GGTATAGAAA AGGAACAACC AAAGAAAGAA CAGGACATAC TGGATCTTTC TGGGTATCAT 000080
000081 CAAACTTCTC CATCCAAGAA TAAGGGACAG CAGCATCTCT TTGACATCCA TAGCCCATTT CTGCTTTGCC AATATCACTT 000160 000161 GTGCATCTGG GGCCACCAAT GCATCCTATC CTAGCAAGTA TCAATGGGAA TAAAGAAGAA ACTTAGAAAA CGACAAAATT 000240 000241 CAAGAAGAGC TGAAGCTCTG GAGCTAGCTT TGGTGGAGAA AGAATGATGC GGGATGTTGG ACTAAGCGAG AAATGCATAA 000320 000321 GAAGCTGCTG AGTTTAACAC AAAGCCATAT AGAGGTCATT TCTATAGAGC ACAATAAATA CCATTATGTG TTAGACGGAT 000400 000401 GGATGGATCA CTTTTCTCCC CTTGCAAGga ccctggtcta accccagata tcatctcttg gactctgcta gcagccatgg 000480 000481 aaatagtacc ctgcttccat ccccgcctct tctcattcca ttttTCAAGT ATAGACACAG CTTAAGGGAC AAACAAGATT 000560 000561 CAAAACATGA GATTTCCAAA AGTAAATTTT CAAGGTACTC CTATGGGAAA GCGCCGTTGA GAATATCCTT CTCAGGTTTA 000640 000641 GCACAGTCCC TCAAGCCCAT CATCCAAGGA AAACAGCCC |
Predicted Small Protein
Name | NONHSAT143646_smProtein_2:193 |
Length | 64 |
Molecular weight | 7291.2002 |
Aromaticity | 0.0793650793651 |
Instability index | 60.5936507937 |
Isoelectric point | 6.14764404297 |
Runs | 10 |
Runs residual | 0.0137674117266 |
Runs probability | 0.0419625507861 |
Amino acid sequence | MLGQNEGIEKEQPKKEQDILDLSGYHQTSPSKNKGQQHLFDIHSPFLLCQYHLCIWGHQC ILS |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLEEEEELLLHHHHHHHHHEELLLEE EEL |
PRMN | - |
PiMo | - |