NONHSAT143701

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT143701

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3882 nt

Genomic location

chr16-:74705755..74712311

Exon number

3

Exons

74705755..74706436,74708858..74708998,74709253..74712311

Genome context

Sequence
000001 CCATCTATGC CGCCTGTTCT GATGACTGCC TTCCCTCACT GCCCATTTAG CAGGGATGGG CTACAAGTCA TTTCCCCTTA 000080
000081 GATGCCTGGA CACCACTTCT ATGTCCCTAC AACATACAAT Gggggatctt gttaggttta aggactcaga ctcacaggac 000160
000161 aggtctaggc cacacttgtc attcagttac ttagaaggat gtcagcagcg ccaaaccttt ccctccaggg tgagtcctcg 000240
000241 cagtcatcca ggagatactc tctttgtcag agccacaggt gctggagaaa gaggctccca ttaggtgggt gtgggtcatc 000320
000321 caggcttaga agcccatgac ctgcaggagt cagcatctct ggtaacaact ctgcaggcat gccttccagt gtttctgcaa 000400
000401 gtgacatgtg agttgctgtt ttaagagctg ccacatctgg gtatggtggc tcacgcctgt aatcccaaca cttagggagg 000480
000481 ctaaggcggg tggatcacct gaggtcagga gttcaagact agcctggcca acatagtgaa acactgtctc tactaaaaat 000560
000561 acaaaaaatt agccgggtgt ggtggcgcac gcctctagtc ccagctccta aggaggctga ggcaggagaa tcacttgaac 000640
000641 ccgggaggca gaggtttgca gtgagccgag atcgcgtggt tgaactccag cccgggcaac aacagcaaaa ctccatctcc 000720
000721 aaaaaaaaag aaaaaagaaa agaaaagagc tgctacatgg ccaggcatgg tggcttatgc ctgtaatccc cgcactttgg 000800
000801 aagggaaggc aggaggatca ctttgagccc aagagttcaa gaccagcctt ggcaacacag tgagacctcc ccctcttcaa 000880
000881 aaaatttaaa aatcagccag tcatggtggt gcacacctgt aattccagct actcaggaga gtgaggcagg aggaggatgc 000960
000961 ctagagccca ggaggtcaag gctgcaggga gctatgttta cgccactgta taccctagcc tgggcaacag aatgagaccc 001040
001041 tgtctcaaaa aataaaaaaG Aggctgggcg cggtggctca cacctgtaat cccagcactt tgggaggcca aggcaggtgg 001120
001121 atcatgaggt taggagatcg agaccatcct ggctaacaca gtgaaaccct gtctctacta aacaatacaa aaaattggcc 001200
001201 aggcgtggtg gcaggtgcct gtagtcccag ctactccgga ggctgaggca ggagaatggc atgaacccag gaggcagaac 001280
001281 ttgcagtgag ctgagattgc accactgctc tccaacctgg gcgacagagt gagactccgt ctcaaaaaat aaataaataa 001360
001361 ataaataaat aaGAAAAAtt tgctacaaag cattcccatc agctgtttac tgtgtagtcc tgttaccccc ttgatcctgc 001440
001441 ccagaagcaa tctaacaatc agcagtcatt tttattttca tcatcagcaa tgttactaag agccataggt gacagtctac 001520
001521 ctgtatcaga tttccagggg aacagagcta agaagttcac tggaagtcag attttcatac agaagaggaa aagattttgt 001600
001601 gaactcagtg tccacaATTC CCAAATGCTA AAAGAATTTT AGCAGTTTTC TTTGTCATCC ATAGACGGTT TTCTTTCTTC 001680
001681 CAGTCCTACG AGTGTCAGAG ACAGCCCTCA AATAATAGCA GACAGGCCTT TTTTGCCTTT CAGATGCCTT TCCCCCTCTG 001760
001761 CGATGGTGAT ATAAGTACTC CCAAAACACT GTTTCTACTA CTCTCACGCT CTTCATGCAG CCTGACTATA AGATGCGCTA 001840
001841 TTCCACCTTT CATCCCTGGT ATCCCATACG GCGCTAGATG TAAGAGAATG TCAGTGCTCA GGAAACGTGT GAGCAaatga 001920
001921 atgaatgaat gaatgaaAGG GGGATGAGCC ATCTAAGTGC CTTATCCCTT TTCTCACATT GCCCCTAGAT TTGGGTACCT 002000
002001 GGCTGAGTTT GGGGCTGGCA GCCTTCAGCA CACCAATGGT GTCAATGGCA GGTGTGCATG GGACAAGAAC ATATGCTGTC 002080
002081 ATGATTGTGC TACAGTTTCT TTAAGAACAC CAGGTGACCG CGCAGGCCTG GGGGGATGAC TCACACTCGT CACGCCAAAG 002160
002161 CCAAAGGATC AGGCTGACCC CCCATAAAGT CAGATAGCAC AGAGGGGATG CCCCCATGCC ATTTTTCCAT CTGCTTCTTT 002240
002241 GGGAAAAGGC GAGCCAGGCA GTGGCTCTAT GACCCCTCTC CACTCTCACT GAGTGGAGTT CAGTCCTCAA CTGAGAAACC 002320
002321 CCTACATTTT AACATAGTCA TACTGGCAAC AACTACAACT TAGCAGGTCT TACTGGTGCT TTATAACCAT TATCTCAAGT 002400
002401 AATCCCCCCT GTCATCGCCC CATTTTATAC AGAAGAAATC TCTTTGTGTT TCTCTTGGTC ACTGCACTGT GATAAGTTGA 002480
002481 ACCCATAATG TTAACCAATA AAGTAGCCAC ACAGACAGAA GTCACGACAG GAAATAAATC CCTAAGGTAA AAGACAATTC 002560
002561 CCTGGCAATT GTGTGTAGCA ACAATCCCTG CCCTTTACTC CTCTACCCAA GATCTTGCTT GTTTCTTTCT AAGTTGCCTC 002640
002641 TCTATCTAGC TTGCAGGATT TGAGTTGAGG AAAACACAGA CTTCCATGAG TTTGGGAACT ACGAGAGAAA AGACAGACAG 002720
002721 AGTCAAATCT ACAGCATATC TCTCACCTCA GGAACTGGAA GATGTATTTT ATCAATATGA TGTAAAGTCT GAAATATACA 002800
002801 GGTACACTCA CGTTCTGGTA CAGATTCTAA CTCAGATGTG CATAATAGGA AAACCCAAAT CAAACTCCTC CAAGGACCAC 002880
002881 CTAAACTCAA CTCTGTTGAA TGAAATTGGG TAGTAATCAA AAAATTCACT GAGTTTTCTG GCAGTGGCTA GAGGGACAGG 002960
002961 GGAAAGGGGA GACTAGTTAT GGTTGTTCAG TTTCTTGGTT TTCTTTTAGC TTTGGAATCG TCCTCTGGGA AATCGCCACT 003040
003041 GGAGATATCC CGTTTCAAGG CTGTAATTCT GAGAAGATCC GCAAGCTGGT GGCTGTGAAG CGGCAGCAGG AGCCACTGGG 003120
003121 TGAAGACTGC CCTTCAGAGC TGCGGGAGAT CATTGATGAG TGCCGGGCCC ATGATCCCTC TGTGCGGCCC TCTGTGGATG 003200
003201 AAATCTTAAA GAAACTCTCC ACCTTTTCTA AGTAGTGTAT CAAAATCTAA ACCAAGGAGT CTCTGGACAA GAAGCTGGGA 003280
003281 GAGGCACAAA CTGGACATCT CTCTCTCTCA TATCCTTCGG CATTGGGTTA TCTATGGGTG CAAGGAGTGG GCACGCTTCT 003360
003361 CTGTTACAAA TAGAAAACGA TTCCAGTCAT ACAGGACACA TCCCACTCCA AATGATATTT CCAAAAACAT ACCTCTGACA 003440
003441 GTAACTTTGA TAGATGGTTT GTCAAATGTA TCTTTCTGGg tatccacacc tcttggcaat gaaatttgca gctcctccct 003520
003521 tccataaatg aagtctcttt ccccaccatt tgaatctggg ctggcactgt gacttgattt gatcaataga atgtggaaga 003600
003601 agtgactgta tgccagttcc aagcctaggt ttcaagaggc cttataaatg tctgttggaa ccttacccag ccatgaacat 003680
003681 gttgagtgag catgctggag aatgagagac cacatgaagc agaaacatgc tttcctagct gaagtcatac tagcccaacc 003760
003761 aacatggcag ctaacacatg aatgaggcca atcaagacca gaagaaccac tcaagcagat cccagcccaa attgcccatt 003840
003841 cacacaatca ggagctaaat aaattactgt tgtcttaaca ct
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Predicted Small Protein

Name NONHSAT143701_smProtein_2207:2362
Length 52
Molecular weight 5780.6586
Aromaticity 0.117647058824
Instability index 87.6509803922
Isoelectric point 9.38287353516
Runs 10
Runs residual 0.0418365365948
Runs probability 0.0489224518636
Amino acid sequence MPPCHFSICFFGKRRARQWLYDPSPLSLSGVQSSTEKPLHFNIVILATTTT
Secondary structure LLLLEEEEEELLLLLHHHHEELLLLLLLLLEELLLLLLEEEEEEEEEELLL
PRMN -
PiMo -