NONHSAT143724

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT143724

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1252 nt

Genomic location

chr16+:75259972..75262093

Exon number

4

Exons

75259972..75260623,75260718..75260895,75260989..75261204,75261888..75262093

Genome context

Sequence
000001 GCCTTTTGCC CACCCCTCAC CCCCAGCCCC TGCACCCTCT GGACTTGGGC GGCCTCCTGG GTTTATGTGC CCCCGGGCCC 000080
000081 CACACCCCAA TCCACCCCAG CCACTGACTC AGAGTCCTCA AGAGCACAGG GACCCAAGGA GATACAGCCA CCATGTCCCA 000160
000161 GCACCCTGGG CTCAGAAGGG GACAGACACT CCCTTGGGTA CACAACGGTC AGGGGAGGGG GCTGAGGGCA CTGCAGTGGC 000240
000241 ACCTCAGGAC ACCATCAACT GCCGGCTGTT CTGGGGAGGA TGCCAACTCC AGCTCCGAGG CCTGGCAGGT GTCCCTGCAG 000320
000321 ATCAGAGAGG TCCTGCCCAT GTGGTGGGGG GGACCCTGGG TGGTGGGCAG GCTAGAGTTG GGGGGAAGtt taaaacaatt 000400
000401 tttattaata tataaataga gacttgggtc tcactatgcg gcccgactgg ccttgaagtt tggcctcaag tgatcctcct 000480
000481 gcctcagcct cccaaagtgc taggattaca CAGCCCTCGC CCCTCGGGTC CCTTCTGCCC TTGTGGGAGT TGCCAGTCCT 000560
000561 CCTATCCTCC CAGTACAAAG CTGGCTTCCA CTTCTGCGGG GGCTACCACA TCAGCGAGGA CTGGGTGGTC ACCGCTGCCC 000640
000641 ACCAGGGGTC AGGAAAAGGG TCGGAAATGA ACTGCAGGCT GGGGAACCAG CACCCCCATC CCCCGGCCAC AGGCAGAGCC 000720
000721 GCCTCTGCAG GTGACACCCA CCCCAGGCCG TGCACCCCAC CTCCACCCTC GCAGGCCACC CAGACGGCag cttggggaaa 000800
000801 cctgggaggt cccgtaccct cactgtgcag GCACCCCCAT GAGCCCAGGC ACCGCCTGCC ACCCTCACTC TCCAGGAAGA 000880
000881 GCCACCGCGT GGTGGCCGGG ATCGTGTGGT GGCCAGGGCG TCTGACCTTG GCTCTCACCC GGAGGCCATC CAGGTGCTGA 000960
000961 GGATGGCTAA CGCTAAGGCC ACACAGCCAG GGAGAGGAGG TGGCTCGTGA CACCACGATG GGACACACCC ACCTCTGGGA 001040
001041 GAGGAGGGTG ACTCCGACAG CCCTTGCCTG CCAGGATGGA GCCTGGACTC TGGAGGGCAT CGTGTCCTGG AGCAGCACCA 001120
001121 GCACCTCCTG TTGTCACCAG GCGTGGATGC CCGCATCATG AAATTCATGC CTGGGAAGGC GTGGAGGCCG AGACCACCCC 001200
001201 CCCTACCCCG CATCTGTGTA AAACACAAAT AAAGCCATTG AGAGCAACTG CA
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Predicted Small Protein

Name NONHSAT143724_smProtein_152:418
Length 89
Molecular weight 9863.1667
Aromaticity 0.0909090909091
Instability index 50.6613636364
Isoelectric point 10.2557983398
Runs 12
Runs residual 0.005
Runs probability 0.0497850791969
Amino acid sequence MSQHPGLRRGQTLPWVHNGQGRGLRALQWHLRTPSTAGCSGEDANSSSEAWQVSLQIREV
LPMWWGGPWVVGRLELGGSLKQFLLIYK
Secondary structure LLLLLLLLLLLLLLEELLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLHHHHHHHHHHHHH
HLLLLLLLEEEEEEEELLLHHHEEEEEL
PRMN -
PiMo -