NONHSAT143899
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143899 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
882 nt |
Genomic location |
chr16-:80601476..80603566 |
Exon number |
4 |
Exons |
80601476..80601656,80601845..80602010,80602704..80602793,80603122..80603566 |
Genome context |
|
Sequence |
000001 AGCCATCATG GTAGGGTGTC CAGGGTGAGG GGAGGGTGGT GTGAATCCCC AGTAATGCAG GTCCTTTCCA GGCCAGGCCC 000080
000081 CTGGTCCCCA GGAGTGCGGG GATGCCTGAG GTCTACTGCT GCCTTATCCA GAGCTGCCAT CCCCGGCGAT GACTCAGAGT 000160 000161 TCCTGTGGCC CCAGCATCAT CCCTCCATCC CTGGCTGTGA GGCAGGAGCA GAGTTGCAGA CCTGAGAGGC CTTGAATTTG 000240 000241 TTTGATATAG GACTTTGCCA CCAGACAAAG TGCTTTGCCT GTGAGGTCTG GCTTGGCCTG GCCTCTGAGA AAGAACAAAC 000320 000321 ACAGACCTCA CTGGAAGGAA CCTGGAGAAC GGGAGAGGAG AGGCTGCTGC TGTCTGCCCT CCCAGCAGCA GATATAAAGA 000400 000401 CAATGGGCTT CTAAGTCCCC TAGAGTCcca gctgtgtaat ttaagGAAGG AGCATGGAGA AGACAAGAAC AAGGCTCTCA 000480 000481 GAAGGAAATG GTGTGGCTGG AGCCATGAGA ACTggttgtg gagggggtga ggaagGCAAA TATAATTTCT GACCTACGTA 000560 000561 ATGATGTATG CACAAGAAGC CTCTCTTGAa tgtattaatt cagtaaacag ttatggagtc cttacaatgt gctagtggga 000640 000641 ctttgaagat gaatccaaat ttggatcctg gcctggaaag gctcaaagcc caatatggga gCCTGGATAC AAATGTGAAA 000720 000721 CTTATCTTCT TTTATTAACC AATCAATCAC CTCCTGCCAA AACAACATCA Gcaaaaacaa cagaaaaaaa caaaaacaaa 000800 000801 aacaaaaaca aaTCTGTGTa cacaagacct ttgtttccac agcagacttg gctaaaggtt tgggcatgca tatgcatacc 000880 000881 cc |
Predicted Small Protein
Name | NONHSAT143899_smProtein_560:634 |
Length | 25 |
Molecular weight | 2658.0756 |
Aromaticity | 0.0833333333333 |
Instability index | 50.9125 |
Isoelectric point | 3.79461669922 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0380321497969 |
Amino acid sequence | MMYAQEASLECINSVNSYGVLTMC |
Secondary structure | LLHHHHHHHHHHHHHLLLLLEELL |
PRMN | - |
PiMo | - |