NONHSAT143902
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143902 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2046 nt |
Genomic location |
chr16-:80631797..80633843 |
Exon number |
1 |
Exons |
80631797..80633843 |
Genome context |
|
Sequence |
000001 TCTGTAATTC ATGGCTAATC CGAAGAGTTT GATTGAGTTG ATGGCGGCAG GGACCAGATA GACACCTTGG TGATTGTCTT 000080
000081 TGGCCATAAG AATAGACCAA GGATAGGTTT TCCAGAGACA CCTTCATACT GTAAACATGG TTTAGACACG GTCATAGGGA 000160 000161 AGGCTGCTGG TCCATCATTT GTTCTGAACA AATGGCATTT CCTGCTCCTG ACCCTGGCAG TTGGCCCCAG ATTCCTTGTC 000240 000241 GATGACTTGG AAACGTCCAT TCTGGGTAAG GTCAGCACTC CCTGAGAGAT GTTAACAAAG TTTACCTATG AGTCTTACTG 000320 000321 TGTAGACAAT CTGAAGTCAA TTTTAGTTAC ACAATCAGCA TTCCCATGTG TCCTCAGTGT CTTATCAATG AACTATGTGT 000400 000401 ATCAAGCCAT ACTAAACTGG AGTTTAGCAG GACAGAGGCA AACTAAATGT AGAACATAAC ATATCAGCTG AATATGTCTA 000480 000481 TCCAGGACTG TTTTTCTAGA ACATAAATCA TGGAGCTCCT TGACAGTGTA TCCACTGTTT TTGGGGTTTA ATAAAACCAA 000560 000561 CTAGAATTTA GACTTAAAAG AAATTATTAT TCCTTTTGGT TGTCCACATA AAGTAGTCCA GGGCTATCAT ATGGCTAAAA 000640 000641 TCAAGTTATT TGGTTCATCT CTGGTATGTA TTTATAAAGT CAACTTATCA GCCATTAAGA TGGAGATTTG CTTTAAATTT 000720 000721 TTGCAGTGTG TGTGGCAGTC AGAAAAACCC ATATCTAGTT TTCAACTTCA CCTCTGGTGT TTTTATGGCT TAACCTTATA 000800 000801 TCATTGATCC AACATCTAGC CTGATGCTGG AGCTCTTATT TCTAGCCTGA TGCTGGAGCT CTTATATCTA GCCTGATGCT 000880 000881 GGAGCTCTTG AAGCTGACTC TTGGAAGTTT GGAGGGTGTA GAGTTTCCCA TCTAGTATTT AATTTGTCCC TGTGCCATTA 000960 000961 GTCCCAGCTT GAAGTCATTT GCCAGTGTCG ATGTTGACAG GATTGTGACA ATATTGCCTT TCATAAAACC GAGAACCAAA 001040 001041 GAATTCCATT ATTCTAACAA AGCCTGAGTT TCATAGATTG TGGGCACATC TAGACAGATA TGTGCATGCT TGATGGTGCA 001120 001121 GAGAAACTGC TGACTTCCAC CAACCTCATG CTCCCCCTGG CTGGCCATAC AGAGGGATTC GTTGTCATAT TGAAAAGGCT 001200 001201 CTGAAAGATG AGTTTCTAAT TGAAGCTCAC TATCTCAGGT TGGTGTTTCT ACTGTGCAGT CCCAAGCCTG TATCCATATC 001280 001281 ATAAAAGTGG AGGCCTGGTA CTCCTCCAGG TTATCTGGCC AGTGTAGACT CCTCCACCTG AATATGAACC TCCAGGGTAA 001360 001361 GAATTTTTCA GACATGTCTA TACTGAACAG TAGGATCCTG CACTTTCCAA ATGTCTGCCT CCTTTTGTTC TTCATTGACC 001440 001441 CATTCTAATT CCTGTTAGGT GTGAGAAGAA TTGTCTTCAG TTCTCTCTCC ATTCTCATTC ATGATGGAAT CATTGATCCA 001520 001521 TTGACCAGTT GAGAAATGAT TGATGCTGAA GAGGTGGTAT TCTGTTGGTA AGGCTTATTA CCAAACTTCC GATAATGAAG 001600 001601 CAGGCTACCA AAAACTTATC CAGCCCACCC TAGGAGTGTT TGGATTTGAT CATGGATGTA GCATACACCA AAATCCACCG 001680 001681 AGACCTTTGC AAAATTAGGC TACTTGTTTT ATTTTGCCAG ATTATCATGG GAGAGTCTTT AACTAGTTCT GAATATTTGT 001760 001761 AAGTCTGAGT ACTTCATAGA ATTATAAAGA AGGTACAGCT GACCCCTTCT CACCATGTTG TAAATATTTA CTGAGACTGG 001840 001841 GTGCAGTACT GAGGGATAAT AATCTTCTGA TTTATCAAAT CCTGACTGTC TAGAGCAAAT TGTACACTCT CTTTGTGAAT 001920 001921 GGTCCTGTAA CGTGTATGAA CACATTTCTG GGTGCCTTAG AAGTTGTATT TTTCATGTGT GCTAATATGC AGTATTTATA 002000 002001 CATTGTGAGA AGCTGCTTTG AATAAAAAGG TTGAAACTTC GTCTGC |
Predicted Small Protein
Name | NONHSAT143902_smProtein_1343:1447 |
Length | 35 |
Molecular weight | 3985.6939 |
Aromaticity | 0.147058823529 |
Instability index | 56.2382352941 |
Isoelectric point | 6.49578857422 |
Runs | 6 |
Runs residual | 0.00967982129561 |
Runs probability | 0.0603397515162 |
Amino acid sequence | MNLQGKNFSDMSILNSRILHFPNVCLLLFFIDPF |
Secondary structure | LLLLLLLLLLHHHHHHHHHLLLLHHHHHEEELLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i????????????????????????????????? |