NONHSAT144135
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT144135 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
555 nt |
Genomic location |
chr16+:85705437..85706254 |
Exon number |
2 |
Exons |
85705437..85705747,85706011..85706254 |
Genome context |
|
Sequence |
000001 GGTTCAGCAG ATGTCCTTGG GGGGCAGGGA TGGGAAGCAG GTCTCAGATC ACTCCCAAAG TTTTTACATC TGGGGGTTCC 000080
000081 AAGAACTCCG AGTTTGAGCC AAGACAGCAG CAGATGCCGA TTCTTAAGAC TCTGGAAGAG CCAGGGACAG AACACAGGCT 000160 000161 GAGAAGTGGA Ctttgtttct ctttttgagg cgaagtctca ctctgtcacc caagctggaa tgcagtggcg cagtctcggc 000240 000241 tcactgcaac ctccgcctcc tgggttcaag cgattctcct gcctcagcct cccgagtagc taggattaca gGAGTTGAGG 000320 000321 AGCCAGAAAC AGAAGATGGT CTCAGAAAGG GAGCGGCTCC AGGCAGAACT GGACCACTTA CGAAAGTGCC TTGCCTTGCC 000400 000401 TGCAATGCAC TGGCCTAGGG GCTACCTGAA GGGATATCCC AGGTGACGGT TTCCCTTGCA CTAGGCCGAA CCTATAGTAT 000480 000481 AGAAATATTA TCTATTTTAT TACCTTGAAT ATTTAATATT TTTCACTGGG AGGTTTGAAG CTTACAAAAT GAGAA |
Predicted Small Protein
Name | NONHSAT144135_smProtein_29:187 |
Length | 53 |
Molecular weight | 5856.5844 |
Aromaticity | 0.0769230769231 |
Instability index | 76.7442307692 |
Isoelectric point | 9.18341064453 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0329937780918 |
Amino acid sequence | MGSRSQITPKVFTSGGSKNSEFEPRQQQMPILKTLEEPGTEHRLRSGLCFSF |
Secondary structure | LLLLLLLLLEEEELLLLLLLLLLLLLLLLLHHHHLLLLLLLLEELLLEEEEL |
PRMN | - |
PiMo | - |