NONHSAT144192
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT144192 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1531 nt |
Genomic location |
chr16-:86365450..86371162 |
Exon number |
5 |
Exons |
86365450..86366284,86366565..86366650,86367294..86367513,86369284..86369478,86370967..86371162 |
Genome context |
|
Sequence |
000001 CACCAGGAGA TCAGAACCTT CTGGAATCTT AATATGCGAG GACTCGGTGG AGAAGGCGGC ACTGAAGAAG AGTCGTCCCT 000080
000081 AGGCCAGGCT GGAGGGAAAC TCAAGACGGC GGCCTGGCCC TCCTGGGTGG CGGAAGTGGG AGCAGCAGGA GCCCTGGCGG 000160 000161 ATCCGGGAGG CCAGAAGAGC GGAAGCTTCC TCCCCTCTCA GCAGCTACAG TGCATTCCAG GCCCTGGTCT CTATGCGGGA 000240 000241 GAAGCCAGCA AAGACCCTGT CCTCAGGAAG CTTCCATTTC AGTGCGGGAG GACCCACAAT CCATGAGGCC CCGGGCCTGC 000320 000321 GGGTGTCAAG TCCTGCGAAG GAAAATAAGG CAGGGAAACA GGCTGGAGAC TGCGGGTGCT GCGTGATGTT GTTTAGGACA 000400 000401 GCCACAAGGA CTTTCGGGGG TCGTGGCAGC TGCTCCACTT CCAACTTCCA GATCCCTCTC ACTTTCCTCT TCCCACCAAC 000480 000481 TCCAACCTGG GACCAAGCAG GGGAAAGCAG CTGCAGCCCA GCTTGACGCC CCTGCAAATG GAGACCTGTG CACCTGGTTG 000560 000561 TGAGCATTTT AAAGGGTGTC ACACAGGGCA TACCCTTCGG TGCCTGGATT CCTTTGATGA AAGGGCAAAG CCTTGAACCT 000640 000641 AAGTCATCTT CGAGTCCTCA GCACTTCACC CAGAGCCTGG CACACAGTAG GAGCACAGAA AGGTTTACAT CCAGCAGGAG 000720 000721 TTGGCCCTGA GCTCTGAGTC CAGATCATTG CTCTTGGCTG AAGCAGCCTG TCTACTCACA AAGATGAGCA TGGTCCCTGC 000800 000801 CACGAGGAAA CTCGTGGTCC TGTGGACTGC GGTGTGGAGG GAAAGCTTGG GATTCTGAGC CTGATAATGC ACCATTACAT 000880 000881 CCCCACTCAC TCGGGCTGTG TGAACCCAGC AAGTCACAGG ATCACTGGGT GGTGAAAGAA AGAAACACTC ACAGAAGCGT 000960 000961 CTGTGCTTGG AGAGCCATCT GGTCCGTCAT TGTGACTGCT GCTCTCATTG CTATCATGGG TGTCACCATT GCCATCACTC 001040 001041 AAGGACTTCT CTCCAGGCCC CGAAGCCAAG CTGGTGCCTG GTTCCTCTGG GTTGGGAGAG GGGCTGGGCA TGGACAGGAG 001120 001121 GAGGGAAAAG GGACCTGTGC TAGCAGGTGA TGCCATCCAA GACATCTGCA TCCTAATCCC TGGAACCTGG GATTCCACTA 001200 001201 GGTGCCATGG CAAAGAGGGA TTAAGGTGGC AGGTGGAGTG AAGGTTGCTA ATCAGCCGAC CTTAAAGTAG GGAGATGATC 001280 001281 CTGAATGAGA CAAAAGAGAG AACCAGTCAT GGTGTCATGA GAAGGACTCA AAATGCAACT GCTGACTTTG AAGATTAAGG 001360 001361 GGCTACAAAC CAAGGAACGT GGTAGTCTCT GGAAAAGACA AGGAATAGAC GCTGCGTTGG GGCCACCAGA AGGAACCAGC 001440 001441 CCTGTCAACA CCCTAATTTT AGCCCAGTGA GGCCTGTGCT GGACTTCTGA CCTCCAGAAC TGTAAACTAA TAAATGTGTG 001520 001521 TTGTTTCTGC C |
Predicted Small Protein
Name | NONHSAT144192_smProtein_1109:1240 |
Length | 44 |
Molecular weight | 4907.5723 |
Aromaticity | 0.046511627907 |
Instability index | 63.7 |
Isoelectric point | 6.54400634766 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0174628409922 |
Amino acid sequence | MDRRREKGPVLAGDAIQDICILIPGTWDSTRCHGKEGLRWQVE |
Secondary structure | LLLLLLLLLLLLLHHHHLLEEELLLLLLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |