NONHSAT144341
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT144341 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
772 nt |
Genomic location |
chr16+:88068658..88110441 |
Exon number |
4 |
Exons |
88068658..88069000,88071579..88071617,88105675..88105818,88110196..88110441 |
Genome context |
|
Sequence |
000001 catatatggg gttcagcacc atccacagtt tctggcgtcc acgtggtggg ggtagggggt gcttcttgaa accctcatgg 000080
000081 atgaggggga ctactgTGAA CCAAAAGCTT AATTTAAAGA AGTGACCACA GACTATATTG CACTATTCAG GATTTAGTTA 000160 000161 TCTTTTTGAA TTGTAAACAG ATAATCAAGA ACAAACATTC CGGAAGATGT TTCTTGTTTC CTTTGCTTTT GATTTTCTTC 000240 000241 TGATGCTTCT TGGTGTCTTT TCTTGCTGCG GATCCCACAG GGACACCTCC ACATCGCCCA GGTGCCGCAG GGGGAGCAAG 000320 000321 TCCAGATCAC GCAGGACAGC GAGGGCAACC TCCAGATCCA TCACGTGGGG CAGGACGGTC AGGTGCTGCA GGGTGCACAG 000400 000401 CTGATCGCCG TGGCCTCCTC GGACCCCGCG GCGGCGGGCG TGGATGGGTC GCCACTCCAG GGCAGCGACA TCCAGGTTCA 000480 000481 GTACGTGCAG CTGGCGCCAG TGAGTGACCA CACGGCCGGG GCACAGACGG CCGAAGCCCT GCAGCCCACG CTACAGCCGG 000560 000561 AGATGCAGCT CGAGCACGGG GCCATCCAGA TTCAGTGAGC GGTGCCCATG GCACCAGGAG CCCCTCGCCG GCTCCGCCTA 000640 000641 CGGCCCGGCC CCCACGCGCC CTGCTCTCAC GGCCTCGGCA CAGGCAGCGG CTGCACGTGT TCTGCTGAAG TGCGTCTGAA 000720 000721 GGCCGCTGCC TCCGCGGGGA ACAGCATCCT ATCAACTGAA AGAGCAGCCG CC |
Predicted Small Protein
Name | NONHSAT144341_smProtein_206:403 |
Length | 66 |
Molecular weight | 7403.5522 |
Aromaticity | 0.0923076923077 |
Instability index | 53.7076923077 |
Isoelectric point | 11.7036743164 |
Runs | 8 |
Runs residual | 0.0272115384615 |
Runs probability | 0.029720897368 |
Amino acid sequence | MFLVSFAFDFLLMLLGVFSCCGSHRDTSTSPRCRRGSKSRSRRTARATSRSITWGRTVRC CRVHS |
Secondary structure | LEEEHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEELLEEEE EEEEL |
PRMN | - |
PiMo | - |