NONHSAT144569
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT144569 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1265 nt |
Genomic location |
chr16+:89755911..89758253 |
Exon number |
3 |
Exons |
89755911..89757032,89757851..89757953,89758214..89758253 |
Genome context |
|
Sequence |
000001 ATTTCTGGGT AAACGTAAGC ATCCGGTTGC TAATGCCCAT AATCCAAACG TGTCACTGCA GAGTACACAG AACTGTTAGA 000080
000081 GAAATAAAAT ACAGAACTTT CCAGAAGCAG CAGGagctgg acatggtgct catgtctatc acctcagcaa ctctggagga 000160 000161 gtcacctgag cccaggtgtt ttttcttttt gtttgttttt gagatgggtc ttgctctatt gcccagactg gagtgcagtg 000240 000241 gcatgatcat agctcactgc ggcctcgacc tcctaggctc aagtgatcct cccacctcag cctcctgagt atctgggacc 000320 000321 acaagagtac ataagcacac ccagctaatt tttaaatttt tggtagagat gggatctccc tatgttgccc aggctggtct 000400 000401 tgaacttctg ggctcaaatg atcctcctgc ctcggcctcc caaagcactg ggattacagg tgtgagccac tgcacccggc 000480 000481 caagcctagg agtttgaggc tgcagtgagc tgtgatcacg ccactgcacc ccagccttgg caacagagtg agaccctgtc 000560 000561 tcaaaaaaac caaaaaCACC ACACACAACT AAAGGTTATA ACAGATGTGA AATTGGCGTA GGTCATTCTG GAAGCTGCAC 000640 000641 ACATTAGCAG GATGTTTTGT AGAGCCATCT TCACACAAAA TAAGGTTTGC TTTTTTCTGC ATAGAGTACC TTATTTGCTT 000720 000721 TTAGGACATT ACAAGAGAGC ACAAAGCAGT GATCTGCATG CTAAGGAGGA CATGGAGAGC CTGGAGCCAC AGAACTGAGT 000800 000801 GGCTGGAGGC CAGGGTCCAG CACAGAGCAA AGTTGGGCAC CCCCTGCCCA GTTCAAATGA GGAAACCCTC CGGGGGAACG 000880 000881 CGTCTCGGGC TAGGGGCGTT GCACAGAGTG GGGACTGAGT GTCACTGGGC ATGAGGTTGT CAGAGGAAAG AACGGGGACC 000960 000961 CCTGTGGCTC AGGGAGAGCC TCCCGTTCAG CGCTAGGGAG CCCACGAGGG GCATCGAGAT GATGTCATCA CCAATGTGTT 001040 001041 TCCATTCCAG ATCGGGCCCG GGACACCCAG ACAGATGAGA TTGTCGCACT GAAGAAGGTG CGGATGGACA AGGAGAAGGA 001120 001121 TGGCATCCCC ATCAGCAGCT TGCGGGAGAT CACGCTGCTG CTCCGCCTGC GTCATCCGAA CATCGTGGAG CTGAAGGAGG 001200 001201 TGGTTGTGGG GAACCACCTG GAGAGCATCT TCCTGGTGAT GGGTTACTGT GAGCAGGACC TGGCC |
Predicted Small Protein
Name | NONHSAT144569_smProtein_32:307 |
Length | 92 |
Molecular weight | 10321.0325 |
Aromaticity | 0.0769230769231 |
Instability index | 53.7835164835 |
Isoelectric point | 5.83929443359 |
Runs | 12 |
Runs residual | 0.00160256410256 |
Runs probability | 0.0445960666549 |
Amino acid sequence | MPIIQTCHCRVHRTVREIKYRTFQKQQELDMVLMSITSATLEESPEPRCFFFLFVFEMGL ALLPRLECSGMIIAHCGLDLLGSSDPPTSAS |
Secondary structure | LLEEEELLLLLLLLHHHHHHHHHHHHHHHLHHHHHHLLLLLLLLLLLLEEEEEEHHHHHH HHLLLLLLLLEEEEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |