NONHSAT144606

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT144606

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5701 nt

Genomic location

chr16+:90004596..90010296

Exon number

1

Exons

90004596..90010296

Genome context

Sequence
000001 agacagctta caccattatt tctgcatatc aagagacttt tatactttca ctaatttgct actgctatct ggaaggcaga 000080
000081 gccaggtgta caggatggaa catgaaggtg gactaggagc gtgaccactg aagcacagca tcacagggag atggtaaggc 000160
000161 ctccggataa ctaatgatta atgatattca tatataatca tgtctatgat ctatatctag tataactcct gttgttttat 000240
000241 atattttatt atactggaac agctcgtgcc ctcggtctct tgcctcggca cctggatggc ttgccgccca caACCAGGGG 000320
000321 cttttcttcc cctcaggtcc acatctgctt tgacagcaaa tctggccagc tgcaccttca gaacacgccc acagcccagc 000400
000401 acccctcatg tctgctgctg cctcgggtct tcctcgtccc gtccgtgcga ttgtctcctc actgggctcc cACAGCTGCC 000480
000481 TGGCCGCTCC TCACATGCAA TTTGGCATCT GCTCCCGTGC CACGCTGTCC TTCATATCCT CTTGTTATAT ATGCCCCGTC 000560
000561 CACACCACGT CCCTAATGTT CTAGAACATT GGGGCCCGGG GAATGCCCTC CACTTGAGTG TCCTCCCTGC AGATATCCGA 000640
000641 CGGCATCACC CTAGGGGACC CTTCCTGGCC CCCCGTGCTC TGAACTCTCC TCCCAGAGCT GCTTTCTGTG CAGCACTCAG 000720
000721 CACCCACTTC AGGAGACTGT GCCTTCAGGG GAGGGGTCAA CAAAGAGGGT CGAATGGCAG GAATGGGCCT AATTAAGGGG 000800
000801 TCCTGGAGCA ctgaaggtga aggggtggga gggctggacc ctggtgagaa ctggagctac aggagaggcc accccggctg 000880
000881 agctgaggtc tctgaagggt aagaacccca tcagagcaga gggagccccg gagccaacac cctgacctct ctctcctccg 000960
000961 tcccccggcc tccaggcacc ctgacttctc tctcctccgc cctccagcct cttgctgagc tcagctggaa gtcaggggac 001040
001041 gtccaggtca gcctccaggc agagaggagg gccaggaggc gtgagaggtg ggtctggggc cagtggaaGG TGAGAACCTG 001120
001121 GCCCAGGTCT AATGTGTCAT TTAGTCCCCA AGtgtctcct ccacggggtc agctccacaa gggacttctg tgttgttccc 001200
001201 gttggacccc ttaacctaga agaatgcctg actcatggta ggtaaagatt tccggaaaaa atgGCTTGAA TTGTGGTCTT 001280
001281 TCATGTAACA ACAGACTGGA CATGGAGCAG TTCCAGGGTG GGGCTGTGTG TTGGTCTCAT CCTTACTGGG TGAGCCCCTT 001360
001361 CGTCCGAGAA AACGGCCCCT GCTCCAGTTG TTAGAAAACC GCCTTTACAg gccaggtgtg gtggctcaca cctgtaatcc 001440
001441 cagcacttca ggaggccaag gcagacaggt catgaggtca ggaaatggag accatcctgg ctaacaaggt gaaaccccgt 001520
001521 aactactaaa aatacaaaaa aattagctgg gcgtggtggc gggcgccttt agtcccaact actcgggagg ctgaggcaga 001600
001601 agaatcactt gaacccagga ggtggaggtt gcagtgagct gagatcccgc cactgcacta cagcccgggt gacagagtaa 001680
001681 gactctgtct caaaaaaaaa aaaaatgtga ttgctatgta aaatgattgt gtgccacaga gatgaccagg tttcttgtgg 001760
001761 atttcatctt aactgtggct gtcctaagac ttttgtcatc cacagataac tgttgtcttg tttCACCAtt tttttttttg 001840
001841 ttttgagacg aagtttcgct ctgttgccca ggctggagtg cagtggcgcg atctcggctc actgcaatct ccgttccctg 001920
001921 ggttcaagcg attctcctgc ctcagcctcc tgagtagctg gggttacagg catgcgccac cacacccagc taattttttt 002000
002001 gtatttttag tagagacggg agttcaccat gttggtcagg ctggtctcaa actcctgacc tcgtgatctg cctgcctcgg 002080
002081 cctcccaaag tgctgggatt gcaggtgtga gccactgtgc ctggccacat tactgattct ttttgttttg tttttcagag 002160
002161 tcaagaaaac cttttttctt ttgagctatt tacagctttt agcagttgag taaagtacac ccctgtgacc aaaacttggt 002240
002241 gcatttttct ttctctacct gagttctcca gattttggaa actgtctgtg agtattcttT TTTATTTATT TATTTAtttt 002320
002321 taaaatttca gtaggtttta gctggtgttt ggttacatga atgagttctt tagtggtgtt ttctgagatt ttggtccatc 002400
002401 cattacctga gcagtataca ctgtatccaa tatgtagcct ttatccctaa ccctctccca ccctttcccc tgagttccca 002480
002481 aactccttca tatcattatt attattgtta ttattattat tgaaacagtg tctccctctg tcacccaggc tggagtgcag 002560
002561 tggcacgatc tcacctcatt gcaacctcca cctcctgagt tcaagcagtt ctcctgcctc agtctcctgg gtagctggga 002640
002641 ttacaggcac acaccaccac acctggctaa tttttgtgtt tcttagtaga gatggagttt caccttgttg gccaggctgg 002720
002721 tcttgaattc ctgatctcaa gtgatctgcc cgctggcttc caaaatgctg gaattacagg tgtgagccac catacctggc 002800
002801 ctattggatc attcttaagc ctttgcatcc tcatagctta gctcccattt atgattgaga atataggatg tttgctttac 002880
002881 cattAACGTA TTCTTTtctt ctcttttttt tttttttttt ttttttgaga tggagttttg ctcttgttgc ccaggctgga 002960
002961 gtgcaatggc gtggtcctgg tccactgcaa cctccacctc ccgtgttcaa gcgattctcc tgcctcagcc tcctaagtag 003040
003041 ctggaattac aggcacctgc caccacaccc ggctagtttt tgtatttgta tttttattta atttaattta tttatttatt 003120
003121 ttgagacgag tctcgctctg tctcccaggc tggagtgcag tggtgcgatc tcggctcact gcaagctccg cctcccgggt 003200
003201 tcacgccatt ctcctgcctc agcctcctga gtagctggga ctacaggcgc ccaccaccgt gcccggctaa ttttctgtat 003280
003281 ttttagtaga gacggggttt caccgtgtta gccaggatgg tctcaatctc ctgaccttgt gatccgcccg cctcggcctc 003360
003361 ccaaagtgct gggattacag gcctgagcca ccccgccggg cccacactaa tactttcaaa tttgtctttt gtttttctga 003440
003441 cctggactca atgaaattgc tactaacttt ttcccgaggc ccagaaagtt gaggttattc tttgtaacac aggtgagaac 003520
003521 attgtgtcag actgccaggg gcttcctgct ctgtaactaa agatgctttg agtctaacat ctggatagat cgtgtccaac 003600
003601 aataaacttc gtttttcttc tgttttcata gaaatacctc ttattaaaaa tctgttcacc ttcctcatat acataagttt 003680
003681 agcccatctg caacctcctg ttatgggaaa tagctgttta acggaactga tcttgtctca ggaccaggaa atcactacaa 003760
003761 agatatgtga cagtgtatct aaatttgttc tttcctgtct atcccaatgt gtcttttttt tttttttttt tgagacagag 003840
003841 tcttgctgtt gtctcccagg ctgaagtgca gcgatctcag ctcactgcaa cctccgcctc ccgtgttgaa gcgattctcc 003920
003921 tgcctcagcc tcctgagtag ctgggattac aggcatgctc caccacaccc agataatttt tgtattttta gtagagatga 004000
004001 ggtttcacca tgttggtcag ggtggtctcg aactcctgcc ctcgtgatcc gcccacttcg gccccccaaa gtgtgggatt 004080
004081 acaggtgtga gccactgcgc ccggcccaga gggatctttt gaaaacaaaa ttataccact tctctgctca caatccttca 004160
004161 atggagagac cgaccacacc aagtgctggt gtggacactg aggtaccgcc ggagcactca cacctcccag caggaacatg 004240
004241 gaaaggcaca accgccatgg gagaaagctt catgcgtcct agggagtaaa aacactgcac gtaacccagc cgttcggttg 004320
004321 ctaaatattg tcccggagaa tgaaagcatt atctccacac agtgatgcac acgcaaatgt ttatagtagc tttattcata 004400
004401 atagcaaaca ctggaaacag cccagacgtt catcaacagg tggatggata gacagtgtgg tcatccatgc atactcagga 004480
004481 ataagagggg taacccacag acatgtgctg ccacatagat atgtctcaga ataagtattt ttagtgaaaa aagctataga 004560
004561 tgaaaaaggc ctacatacga tgtgattcca cctgtataca attagagaaa tgcaccttat tgacagaaag cagctcggtg 004640
004641 gtgtctgggg acagagctgg gttgcagcag gttgcaaagg gcacaggaaa tatttgagga taatggatag ctttttattc 004720
004721 ttttttacga attgtgattt atttattctt tttcactttt gtggatacat ttatggagta catgagatat tttgatacag 004800
004801 gcatgcagtg tgtaataatc acatctggtt aaatgaggta tccatcacct caaacattta gcctttcttt gtattacggt 004880
004881 ccagttatac ttctttagtt atttaaaaat atataataaa ctattgtaga ctatagtcac tctgttgtac taccaactat 004960
004961 tagattttat tcattctatc taactatatt tttgcattca ttaaccatcc ccacatctcc ctccaccttt cccagcctcg 005040
005041 ggaaactatc catgagttta actctatgcc catgagttta attgttttaa ttttcttttt tttttttttt ttgttttaga 005120
005121 tggagtctta ctctgtcgcc caggctggag tgcagtggca tgatctcggc tcactgcaac ctctgtctcc caggttcaag 005200
005201 caattctcct gcctcagccc cctgagtacc tggctaattt ttgtattttt agtagagaca gggtttcact atgttggcca 005280
005281 agctggtctt gaactcctga cctcgtgatc cccccgcctt ggcctcccaa aatactggaa ttacaggcgt gagccaccac 005360
005361 gcccagccAA tttttttttt tttttttttg agaaggactc ttgctatttc tcccaggtta ggtggagagc agtggcgcca 005440
005441 tctcggctca ctgcaacctc cgcctcccgg gttcacgcca ttctcctgcc tcagcctccc gtgtagctgg gactacaggt 005520
005521 gcccgccacc atgcccagct aattttttgt atttttagta gagatggggt ttcaccgtgt taaccaggat agtctcgatc 005600
005601 caccagcctc ggcctcccaa agtgctggga ttacaggcgt gagccactgc gcccggcccc ggccaattgt tttaattttc 005680
005681 ttttagcctc cacaaataaa t
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Predicted Small Protein

Name NONHSAT144606_smProtein_2867:3100
Length 78
Molecular weight 9019.673
Aromaticity 0.246753246753
Instability index 58.5051948052
Isoelectric point 9.89080810547
Runs 10
Runs residual 0.00621118012422
Runs probability 0.0286345168699
Amino acid sequence MFALPLTYSFLLFFFFFFFLRWSFALVAQAGVQWRGPGPLQPPPPVFKRFSCLSLLSSWN
YRHLPPHPASFCICIFI
Secondary structure LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLEELLLLLLLLLLLLLLLEEHHHHHLLLL
LLLLLLLLLLEEEEEEL
PRMN LLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLL
PiMo ooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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